Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 AC130686.1-201ENST00000622936 2466 ntBASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 RCN1P2-201ENST00000398357 915 ntBASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 AC113347.1-201ENST00000413321 391 ntBASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 ABCD1P5-201ENST00000445663 754 ntBASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 AC096582.2-201ENST00000510860 516 ntBASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 AC005412.3-201ENST00000580309 715 ntBASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 BEND3P3-201ENST00000611030 2440 ntBASIC14.17□□□□□ -0.14
CROCCP3Q8IVE0 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CROCCP3Q8IVE0 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CROCCP3Q8IVE0 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CROCCP3Q8IVE0 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CROCCP3Q8IVE0 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.17□□□□□ -0.14
CROCCP3Q8IVE0 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CROCCP3Q8IVE0 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CROCCP3Q8IVE0 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CROCCP3Q8IVE0 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.17□□□□□ -0.14
CROCCP3Q8IVE0 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.17□□□□□ -0.14
CROCCP3Q8IVE0 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC14.17□□□□□ -0.14
CROCCP3Q8IVE0 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.17□□□□□ -0.14
CROCCP3Q8IVE0 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CROCCP3Q8IVE0 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CROCCP3Q8IVE0 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CROCCP3Q8IVE0 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CROCCP3Q8IVE0 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CROCCP3Q8IVE0 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CROCCP3Q8IVE0 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.17□□□□□ -0.14
CROCCP3Q8IVE0 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CROCCP3Q8IVE0 AC091607.1-201ENST00000490318 1060 ntBASIC14.17□□□□□ -0.14
CROCCP3Q8IVE0 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CROCCP3Q8IVE0 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.17□□□□□ -0.14
CROCCP3Q8IVE0 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CROCCP3Q8IVE0 AL160237.2-201ENST00000556165 472 ntBASIC14.17□□□□□ -0.14
CROCCP3Q8IVE0 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC14.17□□□□□ -0.14
CROCCP3Q8IVE0 AP005901.3-202ENST00000581653 237 ntBASIC14.17□□□□□ -0.14
CROCCP3Q8IVE0 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CROCCP3Q8IVE0 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.17□□□□□ -0.14
CROCCP3Q8IVE0 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC14.17□□□□□ -0.14
CROCCP3Q8IVE0 AC114341.1-201ENST00000618070 349 ntBASIC14.17□□□□□ -0.14
CROCCP3Q8IVE0 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CROCCP3Q8IVE0 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CROCCP3Q8IVE0 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CROCCP3Q8IVE0 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CROCCP3Q8IVE0 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CROCCP3Q8IVE0 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.17□□□□□ -0.14
CROCCP3Q8IVE0 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CROCCP3Q8IVE0 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CROCCP3Q8IVE0 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CROCCP3Q8IVE0 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CROCCP3Q8IVE0 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.17□□□□□ -0.14
CROCCP3Q8IVE0 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CROCCP3Q8IVE0 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms