Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
NPAS4Q8IUM7 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
NPAS4Q8IUM7 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS4Q8IUM7 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS4Q8IUM7 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.5■□□□□ 0.23
NPAS4Q8IUM7 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.5■□□□□ 0.23
NPAS4Q8IUM7 ELK2AP-201ENST00000392510 1007 ntBASIC16.5■□□□□ 0.23
NPAS4Q8IUM7 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.5■□□□□ 0.23
NPAS4Q8IUM7 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC16.5■□□□□ 0.23
NPAS4Q8IUM7 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS4Q8IUM7 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.5■□□□□ 0.23
NPAS4Q8IUM7 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.5■□□□□ 0.23
NPAS4Q8IUM7 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.5■□□□□ 0.23
NPAS4Q8IUM7 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS4Q8IUM7 RERG-205ENST00000537647 935 ntTSL 2 BASIC16.5■□□□□ 0.23
NPAS4Q8IUM7 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC16.5■□□□□ 0.23
NPAS4Q8IUM7 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
NPAS4Q8IUM7 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.5■□□□□ 0.23
NPAS4Q8IUM7 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
NPAS4Q8IUM7 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
NPAS4Q8IUM7 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS4Q8IUM7 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS4Q8IUM7 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS4Q8IUM7 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
NPAS4Q8IUM7 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.5■□□□□ 0.23
NPAS4Q8IUM7 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
NPAS4Q8IUM7 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS4Q8IUM7 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS4Q8IUM7 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS4Q8IUM7 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.49■□□□□ 0.23
NPAS4Q8IUM7 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS4Q8IUM7 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS4Q8IUM7 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS4Q8IUM7 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS4Q8IUM7 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS4Q8IUM7 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS4Q8IUM7 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
NPAS4Q8IUM7 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS4Q8IUM7 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS4Q8IUM7 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS4Q8IUM7 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16.49■□□□□ 0.23
NPAS4Q8IUM7 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.49■□□□□ 0.23
NPAS4Q8IUM7 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
NPAS4Q8IUM7 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.49■□□□□ 0.23
NPAS4Q8IUM7 EIF4HP1-201ENST00000453115 687 ntBASIC16.49■□□□□ 0.23
NPAS4Q8IUM7 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.49■□□□□ 0.23
NPAS4Q8IUM7 AL391280.1-201ENST00000506969 1062 ntBASIC16.49■□□□□ 0.23
NPAS4Q8IUM7 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.49■□□□□ 0.23
NPAS4Q8IUM7 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.49■□□□□ 0.23
NPAS4Q8IUM7 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.49■□□□□ 0.23
NPAS4Q8IUM7 AC138649.2-201ENST00000615886 705 ntBASIC16.49■□□□□ 0.23
NPAS4Q8IUM7 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS4Q8IUM7 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS4Q8IUM7 RETN-203ENST00000629642 400 ntTSL 5 BASIC16.49■□□□□ 0.23
NPAS4Q8IUM7 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS4Q8IUM7 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS4Q8IUM7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
NPAS4Q8IUM7 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.49■□□□□ 0.23
NPAS4Q8IUM7 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.49■□□□□ 0.23
NPAS4Q8IUM7 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS4Q8IUM7 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.49■□□□□ 0.23
NPAS4Q8IUM7 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS4Q8IUM7 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS4Q8IUM7 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS4Q8IUM7 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS4Q8IUM7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.48■□□□□ 0.23
NPAS4Q8IUM7 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS4Q8IUM7 KRT8P4-201ENST00000509735 1454 ntBASIC16.48■□□□□ 0.23
NPAS4Q8IUM7 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS4Q8IUM7 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.48■□□□□ 0.23
NPAS4Q8IUM7 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS4Q8IUM7 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS4Q8IUM7 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS4Q8IUM7 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS4Q8IUM7 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS4Q8IUM7 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS4Q8IUM7 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
NPAS4Q8IUM7 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS4Q8IUM7 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS4Q8IUM7 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS4Q8IUM7 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS4Q8IUM7 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.48■□□□□ 0.23
NPAS4Q8IUM7 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
NPAS4Q8IUM7 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.48■□□□□ 0.23
NPAS4Q8IUM7 SERPINA13P-202ENST00000478994 924 ntBASIC16.48■□□□□ 0.23
NPAS4Q8IUM7 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.48■□□□□ 0.23
NPAS4Q8IUM7 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC16.48■□□□□ 0.23
NPAS4Q8IUM7 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
NPAS4Q8IUM7 AP003171.2-201ENST00000528208 925 ntBASIC16.48■□□□□ 0.23
NPAS4Q8IUM7 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC16.48■□□□□ 0.23
NPAS4Q8IUM7 AC106820.3-201ENST00000561653 397 ntBASIC16.48■□□□□ 0.23
NPAS4Q8IUM7 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC16.48■□□□□ 0.23
NPAS4Q8IUM7 MIR3619-201ENST00000579667 83 ntBASIC16.48■□□□□ 0.23
NPAS4Q8IUM7 RN7SL190P-201ENST00000582519 257 ntBASIC16.48■□□□□ 0.23
NPAS4Q8IUM7 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS4Q8IUM7 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC16.48■□□□□ 0.23
NPAS4Q8IUM7 AC138627.1-207ENST00000641560 1006 ntBASIC16.48■□□□□ 0.23
NPAS4Q8IUM7 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.48■□□□□ 0.23
NPAS4Q8IUM7 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS4Q8IUM7 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms