Protein–RNA interactions for Protein: Q86WS4

C12orf40, Uncharacterized protein C12orf40, humanhuman

Predictions only

Length 652 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf40Q86WS4 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.74■□□□□ 0.11
C12orf40Q86WS4 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
C12orf40Q86WS4 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
C12orf40Q86WS4 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
C12orf40Q86WS4 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
C12orf40Q86WS4 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.74■□□□□ 0.11
C12orf40Q86WS4 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.74■□□□□ 0.11
C12orf40Q86WS4 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.74■□□□□ 0.11
C12orf40Q86WS4 MIR4741-201ENST00000579822 90 ntBASIC15.74■□□□□ 0.11
C12orf40Q86WS4 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
C12orf40Q86WS4 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.74■□□□□ 0.11
C12orf40Q86WS4 SNX12-206ENST00000622259 661 ntTSL 5 BASIC15.74■□□□□ 0.11
C12orf40Q86WS4 AC132938.4-201ENST00000623835 848 ntBASIC15.74■□□□□ 0.11
C12orf40Q86WS4 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
C12orf40Q86WS4 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.74■□□□□ 0.11
C12orf40Q86WS4 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
C12orf40Q86WS4 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.74■□□□□ 0.11
C12orf40Q86WS4 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
C12orf40Q86WS4 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.74■□□□□ 0.11
C12orf40Q86WS4 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
C12orf40Q86WS4 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
C12orf40Q86WS4 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
C12orf40Q86WS4 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
C12orf40Q86WS4 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
C12orf40Q86WS4 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
C12orf40Q86WS4 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
C12orf40Q86WS4 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
C12orf40Q86WS4 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
C12orf40Q86WS4 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
C12orf40Q86WS4 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
C12orf40Q86WS4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
C12orf40Q86WS4 AL118508.1-201ENST00000613502 2345 ntBASIC15.73■□□□□ 0.11
C12orf40Q86WS4 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
C12orf40Q86WS4 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
C12orf40Q86WS4 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
C12orf40Q86WS4 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
C12orf40Q86WS4 CICP13-201ENST00000422015 2789 ntBASIC15.73■□□□□ 0.11
C12orf40Q86WS4 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.73■□□□□ 0.11
C12orf40Q86WS4 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
C12orf40Q86WS4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.73■□□□□ 0.11
C12orf40Q86WS4 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.73■□□□□ 0.11
C12orf40Q86WS4 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
C12orf40Q86WS4 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.73■□□□□ 0.11
C12orf40Q86WS4 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
C12orf40Q86WS4 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
C12orf40Q86WS4 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
C12orf40Q86WS4 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
C12orf40Q86WS4 GOLGA2P4-201ENST00000441462 777 ntBASIC15.73■□□□□ 0.11
C12orf40Q86WS4 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.73■□□□□ 0.11
C12orf40Q86WS4 RNA5SP486-201ENST00000515961 83 ntBASIC15.73■□□□□ 0.11
C12orf40Q86WS4 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
C12orf40Q86WS4 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
C12orf40Q86WS4 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.73■□□□□ 0.11
C12orf40Q86WS4 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.73■□□□□ 0.11
C12orf40Q86WS4 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.73■□□□□ 0.11
C12orf40Q86WS4 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
C12orf40Q86WS4 AC243960.2-201ENST00000600996 747 ntBASIC15.73■□□□□ 0.11
C12orf40Q86WS4 AL606495.2-201ENST00000605867 535 ntBASIC15.73■□□□□ 0.11
C12orf40Q86WS4 AC091271.1-201ENST00000611877 1162 ntBASIC15.73■□□□□ 0.11
C12orf40Q86WS4 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.73■□□□□ 0.11
C12orf40Q86WS4 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
C12orf40Q86WS4 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.73■□□□□ 0.11
C12orf40Q86WS4 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.73■□□□□ 0.11
C12orf40Q86WS4 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
C12orf40Q86WS4 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.73■□□□□ 0.11
C12orf40Q86WS4 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
C12orf40Q86WS4 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
C12orf40Q86WS4 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
C12orf40Q86WS4 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
C12orf40Q86WS4 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.73■□□□□ 0.11
C12orf40Q86WS4 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
C12orf40Q86WS4 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
C12orf40Q86WS4 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
C12orf40Q86WS4 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.73■□□□□ 0.11
C12orf40Q86WS4 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
C12orf40Q86WS4 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
C12orf40Q86WS4 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
C12orf40Q86WS4 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
C12orf40Q86WS4 FER1L4-210ENST00000615531 5998 ntBASIC15.72■□□□□ 0.11
C12orf40Q86WS4 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C12orf40Q86WS4 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C12orf40Q86WS4 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
C12orf40Q86WS4 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C12orf40Q86WS4 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
C12orf40Q86WS4 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.72■□□□□ 0.11
C12orf40Q86WS4 AHCYP2-201ENST00000430630 1300 ntBASIC15.72■□□□□ 0.11
C12orf40Q86WS4 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
C12orf40Q86WS4 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.72■□□□□ 0.11
C12orf40Q86WS4 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
C12orf40Q86WS4 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.72■□□□□ 0.11
C12orf40Q86WS4 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.72■□□□□ 0.11
C12orf40Q86WS4 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C12orf40Q86WS4 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C12orf40Q86WS4 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.72■□□□□ 0.11
C12orf40Q86WS4 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.72■□□□□ 0.11
C12orf40Q86WS4 AC007787.1-201ENST00000588095 1583 ntBASIC15.72■□□□□ 0.11
C12orf40Q86WS4 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C12orf40Q86WS4 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.72■□□□□ 0.11
C12orf40Q86WS4 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C12orf40Q86WS4 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms