Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ZNF546Q86UE3 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ZNF546Q86UE3 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
ZNF546Q86UE3 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ZNF546Q86UE3 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
ZNF546Q86UE3 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ZNF546Q86UE3 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.02□□□□□ -0.32
ZNF546Q86UE3 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.02□□□□□ -0.32
ZNF546Q86UE3 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ZNF546Q86UE3 AC152010.1-201ENST00000415779 2006 ntBASIC13.02□□□□□ -0.33
ZNF546Q86UE3 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF546Q86UE3 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF546Q86UE3 AC011474.4-201ENST00000623523 2076 ntBASIC13.02□□□□□ -0.33
ZNF546Q86UE3 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF546Q86UE3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF546Q86UE3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF546Q86UE3 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF546Q86UE3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF546Q86UE3 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF546Q86UE3 HCG4-201ENST00000418983 998 ntBASIC13.02□□□□□ -0.33
ZNF546Q86UE3 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC13.02□□□□□ -0.33
ZNF546Q86UE3 RBSN-204ENST00000449050 903 ntTSL 2 BASIC13.02□□□□□ -0.33
ZNF546Q86UE3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF546Q86UE3 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC13.02□□□□□ -0.33
ZNF546Q86UE3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF546Q86UE3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF546Q86UE3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC13.02□□□□□ -0.33
ZNF546Q86UE3 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF546Q86UE3 AC074051.2-201ENST00000565115 352 ntBASIC13.02□□□□□ -0.33
ZNF546Q86UE3 AC092329.2-201ENST00000598402 547 ntBASIC13.02□□□□□ -0.33
ZNF546Q86UE3 AL365330.1-201ENST00000607459 531 ntBASIC13.02□□□□□ -0.33
ZNF546Q86UE3 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC13.02□□□□□ -0.33
ZNF546Q86UE3 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
ZNF546Q86UE3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF546Q86UE3 WASH3P-207ENST00000560956 1394 ntBASIC13.02□□□□□ -0.33
ZNF546Q86UE3 FO538757.1-201ENST00000623083 1397 ntBASIC13.02□□□□□ -0.33
ZNF546Q86UE3 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
ZNF546Q86UE3 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF546Q86UE3 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF546Q86UE3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.02□□□□□ -0.33
ZNF546Q86UE3 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF546Q86UE3 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF546Q86UE3 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF546Q86UE3 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.02□□□□□ -0.33
ZNF546Q86UE3 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF546Q86UE3 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
ZNF546Q86UE3 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF546Q86UE3 AC131212.3-201ENST00000624087 4219 ntBASIC13.02□□□□□ -0.33
ZNF546Q86UE3 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 MST1P2-201ENST00000457982 2291 ntBASIC13.01□□□□□ -0.33
ZNF546Q86UE3 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 FXN-203ENST00000396366 922 ntTSL 2 BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 IGHV3-47-201ENST00000425060 335 ntBASIC13.01□□□□□ -0.33
ZNF546Q86UE3 PRYP5-201ENST00000451909 266 ntBASIC13.01□□□□□ -0.33
ZNF546Q86UE3 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 AC104819.1-201ENST00000504587 486 ntBASIC13.01□□□□□ -0.33
ZNF546Q86UE3 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.01□□□□□ -0.33
ZNF546Q86UE3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 AC005332.1-201ENST00000577698 1310 ntBASIC13.01□□□□□ -0.33
ZNF546Q86UE3 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms