Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ATG4DQ86TL0 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
ATG4DQ86TL0 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.12□□□□□ -0.15
ATG4DQ86TL0 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.12□□□□□ -0.15
ATG4DQ86TL0 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.12□□□□□ -0.15
ATG4DQ86TL0 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATG4DQ86TL0 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.12□□□□□ -0.15
ATG4DQ86TL0 GHSR-202ENST00000427970 912 ntBASIC14.12□□□□□ -0.15
ATG4DQ86TL0 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.12□□□□□ -0.15
ATG4DQ86TL0 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.12□□□□□ -0.15
ATG4DQ86TL0 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.12□□□□□ -0.15
ATG4DQ86TL0 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.12□□□□□ -0.15
ATG4DQ86TL0 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATG4DQ86TL0 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.12□□□□□ -0.15
ATG4DQ86TL0 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATG4DQ86TL0 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATG4DQ86TL0 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.12□□□□□ -0.15
ATG4DQ86TL0 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.12□□□□□ -0.15
ATG4DQ86TL0 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ATG4DQ86TL0 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ATG4DQ86TL0 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.12□□□□□ -0.15
ATG4DQ86TL0 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
ATG4DQ86TL0 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.12□□□□□ -0.15
ATG4DQ86TL0 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
ATG4DQ86TL0 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATG4DQ86TL0 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATG4DQ86TL0 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATG4DQ86TL0 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATG4DQ86TL0 BTBD7P1-201ENST00000447253 1453 ntBASIC14.12□□□□□ -0.15
ATG4DQ86TL0 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.12□□□□□ -0.15
ATG4DQ86TL0 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
ATG4DQ86TL0 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATG4DQ86TL0 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ATG4DQ86TL0 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATG4DQ86TL0 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATG4DQ86TL0 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATG4DQ86TL0 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATG4DQ86TL0 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ATG4DQ86TL0 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATG4DQ86TL0 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
ATG4DQ86TL0 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ATG4DQ86TL0 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ATG4DQ86TL0 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ATG4DQ86TL0 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.11□□□□□ -0.15
ATG4DQ86TL0 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.11□□□□□ -0.15
ATG4DQ86TL0 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ATG4DQ86TL0 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ATG4DQ86TL0 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.11□□□□□ -0.15
ATG4DQ86TL0 TERF1P3-201ENST00000505638 1227 ntBASIC14.11□□□□□ -0.15
ATG4DQ86TL0 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.11□□□□□ -0.15
ATG4DQ86TL0 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
ATG4DQ86TL0 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ATG4DQ86TL0 TIMM17BP1-201ENST00000545713 516 ntBASIC14.11□□□□□ -0.15
ATG4DQ86TL0 AC022144.1-201ENST00000602255 1580 ntBASIC14.11□□□□□ -0.15
ATG4DQ86TL0 AC025181.2-201ENST00000606994 802 ntBASIC14.11□□□□□ -0.15
ATG4DQ86TL0 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.11□□□□□ -0.15
ATG4DQ86TL0 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.11□□□□□ -0.15
ATG4DQ86TL0 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
ATG4DQ86TL0 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATG4DQ86TL0 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATG4DQ86TL0 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATG4DQ86TL0 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
ATG4DQ86TL0 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.11□□□□□ -0.15
ATG4DQ86TL0 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
ATG4DQ86TL0 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATG4DQ86TL0 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.11□□□□□ -0.15
ATG4DQ86TL0 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATG4DQ86TL0 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ATG4DQ86TL0 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATG4DQ86TL0 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATG4DQ86TL0 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATG4DQ86TL0 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATG4DQ86TL0 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATG4DQ86TL0 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATG4DQ86TL0 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATG4DQ86TL0 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ATG4DQ86TL0 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ATG4DQ86TL0 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATG4DQ86TL0 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.1□□□□□ -0.15
ATG4DQ86TL0 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATG4DQ86TL0 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATG4DQ86TL0 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ATG4DQ86TL0 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.1□□□□□ -0.15
ATG4DQ86TL0 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
ATG4DQ86TL0 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATG4DQ86TL0 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ATG4DQ86TL0 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATG4DQ86TL0 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.1□□□□□ -0.15
ATG4DQ86TL0 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATG4DQ86TL0 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
ATG4DQ86TL0 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATG4DQ86TL0 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATG4DQ86TL0 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.1□□□□□ -0.15
ATG4DQ86TL0 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.1□□□□□ -0.15
ATG4DQ86TL0 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.1□□□□□ -0.15
ATG4DQ86TL0 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.1□□□□□ -0.15
ATG4DQ86TL0 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.1□□□□□ -0.15
ATG4DQ86TL0 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
ATG4DQ86TL0 AC000095.1-201ENST00000603208 874 ntBASIC14.1□□□□□ -0.15
ATG4DQ86TL0 AC008738.7-201ENST00000609744 511 ntBASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms