Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 AC144522.1-201ENST00000625111 1658 ntBASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 AMT-224ENST00000635808 1610 ntTSL 5 BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 POM121L8P-201ENST00000417732 1281 ntBASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 POM121L9P-203ENST00000441984 1285 ntBASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 NAGK-204ENST00000443872 878 ntTSL 3 BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 AL133466.1-201ENST00000447582 150 ntBASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 SCARNA21-201ENST00000517026 139 ntBASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 AC092171.5-201ENST00000608012 942 ntBASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 DIO1-215ENST00000610607 796 ntTSL 5 BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 TNRC18P3-201ENST00000441896 2691 ntBASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 SOD2-202ENST00000367054 815 ntTSL 2 BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 AC011742.3-201ENST00000439053 820 ntBASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 AC127024.7-201ENST00000625101 200 ntBASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 MIR648-201ENST00000385046 94 ntBASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 AC026410.1-201ENST00000507366 1101 ntBASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 MIR6858-201ENST00000620733 67 ntBASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms