Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SHFQ7M4L6 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHFQ7M4L6 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHFQ7M4L6 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHFQ7M4L6 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SHFQ7M4L6 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHFQ7M4L6 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
SHFQ7M4L6 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
SHFQ7M4L6 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHFQ7M4L6 AL136982.4-201ENST00000437689 1740 ntBASIC14.15□□□□□ -0.14
SHFQ7M4L6 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.15□□□□□ -0.14
SHFQ7M4L6 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.15□□□□□ -0.14
SHFQ7M4L6 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHFQ7M4L6 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.15□□□□□ -0.14
SHFQ7M4L6 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.15□□□□□ -0.14
SHFQ7M4L6 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHFQ7M4L6 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SHFQ7M4L6 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
SHFQ7M4L6 LINC01230-201ENST00000625222 3017 ntBASIC14.15□□□□□ -0.14
SHFQ7M4L6 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHFQ7M4L6 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHFQ7M4L6 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHFQ7M4L6 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHFQ7M4L6 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SHFQ7M4L6 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SHFQ7M4L6 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.15□□□□□ -0.14
SHFQ7M4L6 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHFQ7M4L6 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHFQ7M4L6 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
SHFQ7M4L6 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHFQ7M4L6 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHFQ7M4L6 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHFQ7M4L6 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHFQ7M4L6 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHFQ7M4L6 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHFQ7M4L6 AC004987.2-201ENST00000395959 1148 ntBASIC14.15□□□□□ -0.14
SHFQ7M4L6 AL671277.1-201ENST00000429656 993 ntBASIC14.15□□□□□ -0.14
SHFQ7M4L6 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.15□□□□□ -0.14
SHFQ7M4L6 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.15□□□□□ -0.14
SHFQ7M4L6 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.15□□□□□ -0.14
SHFQ7M4L6 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.15□□□□□ -0.14
SHFQ7M4L6 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.15□□□□□ -0.14
SHFQ7M4L6 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.15□□□□□ -0.14
SHFQ7M4L6 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.15□□□□□ -0.14
SHFQ7M4L6 AC027307.2-201ENST00000591252 911 ntBASIC14.15□□□□□ -0.14
SHFQ7M4L6 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SHFQ7M4L6 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.15□□□□□ -0.14
SHFQ7M4L6 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.15□□□□□ -0.14
SHFQ7M4L6 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SHFQ7M4L6 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHFQ7M4L6 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHFQ7M4L6 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHFQ7M4L6 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHFQ7M4L6 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
SHFQ7M4L6 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.15□□□□□ -0.14
SHFQ7M4L6 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHFQ7M4L6 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHFQ7M4L6 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.15□□□□□ -0.14
SHFQ7M4L6 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHFQ7M4L6 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHFQ7M4L6 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
SHFQ7M4L6 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHFQ7M4L6 FOXO1B-201ENST00000504678 1527 ntBASIC14.15□□□□□ -0.14
SHFQ7M4L6 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHFQ7M4L6 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.15□□□□□ -0.14
SHFQ7M4L6 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.15□□□□□ -0.14
SHFQ7M4L6 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHFQ7M4L6 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
SHFQ7M4L6 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
SHFQ7M4L6 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
SHFQ7M4L6 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHFQ7M4L6 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.14□□□□□ -0.15
SHFQ7M4L6 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.14□□□□□ -0.15
SHFQ7M4L6 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
SHFQ7M4L6 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
SHFQ7M4L6 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SHFQ7M4L6 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SHFQ7M4L6 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.14□□□□□ -0.15
SHFQ7M4L6 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.14□□□□□ -0.15
SHFQ7M4L6 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHFQ7M4L6 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHFQ7M4L6 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHFQ7M4L6 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
SHFQ7M4L6 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHFQ7M4L6 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.14□□□□□ -0.15
SHFQ7M4L6 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.14□□□□□ -0.15
SHFQ7M4L6 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHFQ7M4L6 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.14□□□□□ -0.15
SHFQ7M4L6 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.14□□□□□ -0.15
SHFQ7M4L6 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.14□□□□□ -0.15
SHFQ7M4L6 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SHFQ7M4L6 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.14□□□□□ -0.15
SHFQ7M4L6 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
SHFQ7M4L6 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.14□□□□□ -0.15
SHFQ7M4L6 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.14□□□□□ -0.15
SHFQ7M4L6 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SHFQ7M4L6 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
SHFQ7M4L6 TFAMP1-201ENST00000412727 736 ntBASIC14.14□□□□□ -0.15
SHFQ7M4L6 AL590627.1-203ENST00000421194 1026 ntBASIC14.14□□□□□ -0.15
SHFQ7M4L6 MED15P5-201ENST00000423150 992 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 254.7 ms