Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 AL645939.2-201ENST00000427340 991 ntBASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 KRT18P64-201ENST00000434946 1219 ntBASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 SERBP1P3-201ENST00000459980 809 ntBASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 AC092183.1-201ENST00000469884 875 ntBASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 AC027369.6-201ENST00000525520 931 ntBASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 TREML5P-201ENST00000421694 576 ntBASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 AC009477.1-201ENST00000452936 217 ntBASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 AC009407.1-201ENST00000568958 598 ntBASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 AL390955.2-201ENST00000603032 514 ntBASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 AC100757.3-201ENST00000622361 1406 ntBASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 AC087481.3-201ENST00000602886 1894 ntBASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.03□□□□□ -0.16
NHLRC1Q6VVB1 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms