Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 AL607033.1-201ENST00000623900 1599 ntBASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 SLC7A15P-201ENST00000424028 1363 ntBASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TTC39BQ5VTQ0 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TTC39BQ5VTQ0 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TTC39BQ5VTQ0 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TTC39BQ5VTQ0 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TTC39BQ5VTQ0 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.25■□□□□ 0.19
TTC39BQ5VTQ0 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.25■□□□□ 0.19
TTC39BQ5VTQ0 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TTC39BQ5VTQ0 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TTC39BQ5VTQ0 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TTC39BQ5VTQ0 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TTC39BQ5VTQ0 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
TTC39BQ5VTQ0 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TTC39BQ5VTQ0 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TTC39BQ5VTQ0 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TTC39BQ5VTQ0 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TTC39BQ5VTQ0 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TTC39BQ5VTQ0 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TTC39BQ5VTQ0 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TTC39BQ5VTQ0 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TTC39BQ5VTQ0 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.25■□□□□ 0.19
TTC39BQ5VTQ0 AL035633.1-201ENST00000406139 838 ntBASIC16.25■□□□□ 0.19
TTC39BQ5VTQ0 TOMM22P5-201ENST00000416399 439 ntBASIC16.25■□□□□ 0.19
TTC39BQ5VTQ0 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
TTC39BQ5VTQ0 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.25■□□□□ 0.19
TTC39BQ5VTQ0 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.25■□□□□ 0.19
TTC39BQ5VTQ0 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.25■□□□□ 0.19
TTC39BQ5VTQ0 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.25■□□□□ 0.19
TTC39BQ5VTQ0 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.25■□□□□ 0.19
TTC39BQ5VTQ0 AC140912.1-201ENST00000577171 1054 ntBASIC16.25■□□□□ 0.19
TTC39BQ5VTQ0 SPDYE22P-201ENST00000582158 798 ntBASIC16.25■□□□□ 0.19
TTC39BQ5VTQ0 AC004790.1-201ENST00000612686 536 ntBASIC16.25■□□□□ 0.19
TTC39BQ5VTQ0 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TTC39BQ5VTQ0 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TTC39BQ5VTQ0 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TTC39BQ5VTQ0 AP002414.2-201ENST00000591780 3365 ntBASIC16.25■□□□□ 0.19
TTC39BQ5VTQ0 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TTC39BQ5VTQ0 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
TTC39BQ5VTQ0 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.25■□□□□ 0.19
TTC39BQ5VTQ0 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TTC39BQ5VTQ0 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.25■□□□□ 0.19
TTC39BQ5VTQ0 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.25■□□□□ 0.19
TTC39BQ5VTQ0 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TTC39BQ5VTQ0 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TTC39BQ5VTQ0 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TTC39BQ5VTQ0 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.24■□□□□ 0.19
TTC39BQ5VTQ0 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.24■□□□□ 0.19
TTC39BQ5VTQ0 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TTC39BQ5VTQ0 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TTC39BQ5VTQ0 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TTC39BQ5VTQ0 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.24■□□□□ 0.19
TTC39BQ5VTQ0 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TTC39BQ5VTQ0 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TTC39BQ5VTQ0 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TTC39BQ5VTQ0 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TTC39BQ5VTQ0 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.24■□□□□ 0.19
TTC39BQ5VTQ0 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TTC39BQ5VTQ0 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TTC39BQ5VTQ0 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TTC39BQ5VTQ0 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
TTC39BQ5VTQ0 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TTC39BQ5VTQ0 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TTC39BQ5VTQ0 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.24■□□□□ 0.19
TTC39BQ5VTQ0 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.24■□□□□ 0.19
TTC39BQ5VTQ0 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.24■□□□□ 0.19
TTC39BQ5VTQ0 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.24■□□□□ 0.19
TTC39BQ5VTQ0 GNAQP1-201ENST00000444815 1067 ntBASIC16.24■□□□□ 0.19
TTC39BQ5VTQ0 COX20P2-201ENST00000452636 358 ntBASIC16.24■□□□□ 0.19
TTC39BQ5VTQ0 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.24■□□□□ 0.19
TTC39BQ5VTQ0 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.24■□□□□ 0.19
TTC39BQ5VTQ0 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.24■□□□□ 0.19
TTC39BQ5VTQ0 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.24■□□□□ 0.19
TTC39BQ5VTQ0 RARRES2P5-201ENST00000564013 466 ntBASIC16.24■□□□□ 0.19
TTC39BQ5VTQ0 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.24■□□□□ 0.19
TTC39BQ5VTQ0 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TTC39BQ5VTQ0 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.24■□□□□ 0.19
TTC39BQ5VTQ0 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TTC39BQ5VTQ0 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.24■□□□□ 0.19
TTC39BQ5VTQ0 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TTC39BQ5VTQ0 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TTC39BQ5VTQ0 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TTC39BQ5VTQ0 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TTC39BQ5VTQ0 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.24■□□□□ 0.19
TTC39BQ5VTQ0 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TTC39BQ5VTQ0 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.24■□□□□ 0.19
TTC39BQ5VTQ0 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.24■□□□□ 0.19
TTC39BQ5VTQ0 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 AC138969.3-201ENST00000546612 1459 ntBASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 AC138932.2-201ENST00000548268 1459 ntBASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 AC126755.4-201ENST00000549796 1459 ntBASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 AC018892.3-201ENST00000623986 2499 ntBASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms