Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.1■□□□□ 0.01
RNF220Q5VTB9 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.1■□□□□ 0.01
RNF220Q5VTB9 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF220Q5VTB9 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF220Q5VTB9 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
RNF220Q5VTB9 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC15.1■□□□□ 0.01
RNF220Q5VTB9 HSPA7-201ENST00000445535 1927 ntBASIC15.1■□□□□ 0.01
RNF220Q5VTB9 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF220Q5VTB9 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RNF220Q5VTB9 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF220Q5VTB9 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF220Q5VTB9 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.1■□□□□ 0.01
RNF220Q5VTB9 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF220Q5VTB9 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RNF220Q5VTB9 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF220Q5VTB9 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF220Q5VTB9 AC092474.2-201ENST00000424288 719 ntBASIC15.1■□□□□ 0.01
RNF220Q5VTB9 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
RNF220Q5VTB9 AC093724.1-201ENST00000448659 1027 ntBASIC15.1■□□□□ 0.01
RNF220Q5VTB9 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.1■□□□□ 0.01
RNF220Q5VTB9 KRT18P34-201ENST00000488218 1270 ntBASIC15.1■□□□□ 0.01
RNF220Q5VTB9 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.1■□□□□ 0.01
RNF220Q5VTB9 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.1■□□□□ 0.01
RNF220Q5VTB9 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.1■□□□□ 0.01
RNF220Q5VTB9 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.1■□□□□ 0.01
RNF220Q5VTB9 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.1■□□□□ 0.01
RNF220Q5VTB9 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.1■□□□□ 0.01
RNF220Q5VTB9 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.1■□□□□ 0.01
RNF220Q5VTB9 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF220Q5VTB9 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.1■□□□□ 0.01
RNF220Q5VTB9 AC064836.3-201ENST00000607928 673 ntBASIC15.1■□□□□ 0.01
RNF220Q5VTB9 AL078644.1-201ENST00000609881 752 ntBASIC15.1■□□□□ 0.01
RNF220Q5VTB9 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.1■□□□□ 0.01
RNF220Q5VTB9 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.1■□□□□ 0.01
RNF220Q5VTB9 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
RNF220Q5VTB9 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RNF220Q5VTB9 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF220Q5VTB9 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF220Q5VTB9 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF220Q5VTB9 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RNF220Q5VTB9 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF220Q5VTB9 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RNF220Q5VTB9 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF220Q5VTB9 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RNF220Q5VTB9 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 INVS-201ENST00000262456 2968 ntTSL 5 BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 BX640514.1-201ENST00000583223 1918 ntBASIC15.09■□□□□ 0.01
RNF220Q5VTB9 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RNF220Q5VTB9 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.08■□□□□ 0.01
RNF220Q5VTB9 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.08■□□□□ 0.01
RNF220Q5VTB9 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.08■□□□□ 0.01
RNF220Q5VTB9 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms