Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.96□□□□□ -0.18
RNFT1Q5M7Z0 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
RNFT1Q5M7Z0 AC148477.4-201ENST00000613430 1793 ntBASIC13.96□□□□□ -0.18
RNFT1Q5M7Z0 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RNFT1Q5M7Z0 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
RNFT1Q5M7Z0 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RNFT1Q5M7Z0 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
RNFT1Q5M7Z0 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
RNFT1Q5M7Z0 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 AL590640.2-201ENST00000457038 527 ntBASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 FAM8A2P-201ENST00000528813 1142 ntBASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 AC026790.2-201ENST00000606282 430 ntBASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNFT1Q5M7Z0 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 STK24-203ENST00000397517 4578 ntTSL 2 BASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 CICP13-201ENST00000422015 2789 ntBASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 AC084364.1-201ENST00000551967 1556 ntBASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms