Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13□□□□□ -0.33
ANKRD55Q3KP44 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13□□□□□ -0.33
ANKRD55Q3KP44 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ANKRD55Q3KP44 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
ANKRD55Q3KP44 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13□□□□□ -0.33
ANKRD55Q3KP44 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ANKRD55Q3KP44 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
ANKRD55Q3KP44 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ANKRD55Q3KP44 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13□□□□□ -0.33
ANKRD55Q3KP44 MRPL3P1-201ENST00000400109 1033 ntBASIC13□□□□□ -0.33
ANKRD55Q3KP44 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13□□□□□ -0.33
ANKRD55Q3KP44 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC13□□□□□ -0.33
ANKRD55Q3KP44 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13□□□□□ -0.33
ANKRD55Q3KP44 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
ANKRD55Q3KP44 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13□□□□□ -0.33
ANKRD55Q3KP44 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC13□□□□□ -0.33
ANKRD55Q3KP44 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC13□□□□□ -0.33
ANKRD55Q3KP44 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC13□□□□□ -0.33
ANKRD55Q3KP44 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13□□□□□ -0.33
ANKRD55Q3KP44 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC13□□□□□ -0.33
ANKRD55Q3KP44 AL009183.1-201ENST00000603760 355 ntBASIC13□□□□□ -0.33
ANKRD55Q3KP44 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
ANKRD55Q3KP44 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
ANKRD55Q3KP44 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
ANKRD55Q3KP44 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
ANKRD55Q3KP44 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
ANKRD55Q3KP44 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ANKRD55Q3KP44 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13□□□□□ -0.33
ANKRD55Q3KP44 MTHFR-210ENST00000641407 2387 ntBASIC13□□□□□ -0.33
ANKRD55Q3KP44 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ANKRD55Q3KP44 AL137784.3-201ENST00000623858 2288 ntBASIC13□□□□□ -0.33
ANKRD55Q3KP44 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13□□□□□ -0.33
ANKRD55Q3KP44 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
ANKRD55Q3KP44 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13□□□□□ -0.33
ANKRD55Q3KP44 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13□□□□□ -0.33
ANKRD55Q3KP44 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ANKRD55Q3KP44 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
ANKRD55Q3KP44 PCDHGB8P-201ENST00000502926 1973 ntBASIC13□□□□□ -0.33
ANKRD55Q3KP44 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13□□□□□ -0.33
ANKRD55Q3KP44 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 HLA-A-201ENST00000376802 1334 ntBASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 CAND2-206ENST00000626378 333 ntTSL 5 BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 FAM215A-202ENST00000632077 792 ntBASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 BEND3P1-201ENST00000421591 1944 ntBASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ANKRD55Q3KP44 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ANKRD55Q3KP44 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
ANKRD55Q3KP44 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ANKRD55Q3KP44 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ANKRD55Q3KP44 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms