Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD47Q08722 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.53□□□□□ -0.08
CD47Q08722 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD47Q08722 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD47Q08722 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD47Q08722 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CD47Q08722 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD47Q08722 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD47Q08722 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD47Q08722 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CD47Q08722 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD47Q08722 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CD47Q08722 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.53□□□□□ -0.08
CD47Q08722 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CD47Q08722 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD47Q08722 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CD47Q08722 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD47Q08722 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CD47Q08722 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CD47Q08722 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.53□□□□□ -0.08
CD47Q08722 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CD47Q08722 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD47Q08722 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CD47Q08722 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD47Q08722 PMS2P7-201ENST00000506558 1336 ntBASIC14.53□□□□□ -0.08
CD47Q08722 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD47Q08722 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD47Q08722 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD47Q08722 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD47Q08722 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.53□□□□□ -0.08
CD47Q08722 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD47Q08722 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD47Q08722 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
CD47Q08722 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CD47Q08722 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.53□□□□□ -0.08
CD47Q08722 PRYP6-201ENST00000514804 343 ntBASIC14.53□□□□□ -0.08
CD47Q08722 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.53□□□□□ -0.08
CD47Q08722 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.53□□□□□ -0.08
CD47Q08722 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CD47Q08722 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.53□□□□□ -0.08
CD47Q08722 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD47Q08722 AP002472.1-201ENST00000577490 586 ntBASIC14.53□□□□□ -0.08
CD47Q08722 MIR4313-201ENST00000580760 101 ntBASIC14.53□□□□□ -0.08
CD47Q08722 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CD47Q08722 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CD47Q08722 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.53□□□□□ -0.08
CD47Q08722 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
CD47Q08722 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
CD47Q08722 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
CD47Q08722 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CD47Q08722 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CD47Q08722 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CD47Q08722 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD47Q08722 AL137784.3-201ENST00000623858 2288 ntBASIC14.53□□□□□ -0.08
CD47Q08722 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD47Q08722 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.53□□□□□ -0.08
CD47Q08722 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CD47Q08722 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.53□□□□□ -0.08
CD47Q08722 BX640514.1-201ENST00000583223 1918 ntBASIC14.53□□□□□ -0.08
CD47Q08722 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CD47Q08722 AC010327.5-201ENST00000586923 3061 ntBASIC14.52□□□□□ -0.08
CD47Q08722 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
CD47Q08722 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CD47Q08722 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CD47Q08722 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.52□□□□□ -0.08
CD47Q08722 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.52□□□□□ -0.08
CD47Q08722 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CD47Q08722 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CD47Q08722 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CD47Q08722 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CD47Q08722 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CD47Q08722 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CD47Q08722 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CD47Q08722 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CD47Q08722 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CD47Q08722 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CD47Q08722 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.52□□□□□ -0.08
CD47Q08722 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD47Q08722 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.52□□□□□ -0.09
CD47Q08722 AC023274.1-201ENST00000418278 595 ntBASIC14.52□□□□□ -0.09
CD47Q08722 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CD47Q08722 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.52□□□□□ -0.09
CD47Q08722 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.52□□□□□ -0.09
CD47Q08722 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD47Q08722 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.52□□□□□ -0.09
CD47Q08722 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD47Q08722 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD47Q08722 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CD47Q08722 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD47Q08722 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD47Q08722 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CD47Q08722 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD47Q08722 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CD47Q08722 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
CD47Q08722 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CD47Q08722 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.52□□□□□ -0.09
CD47Q08722 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.52□□□□□ -0.09
CD47Q08722 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
CD47Q08722 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD47Q08722 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms