Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.93□□□□□ -0.18
H3F3AP84243 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.93□□□□□ -0.18
H3F3AP84243 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
H3F3AP84243 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.93□□□□□ -0.18
H3F3AP84243 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.93□□□□□ -0.18
H3F3AP84243 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
H3F3AP84243 AL645728.2-202ENST00000641679 227 ntBASIC13.93□□□□□ -0.18
H3F3AP84243 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H3F3AP84243 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
H3F3AP84243 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H3F3AP84243 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H3F3AP84243 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.93□□□□□ -0.18
H3F3AP84243 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H3F3AP84243 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
H3F3AP84243 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.93□□□□□ -0.18
H3F3AP84243 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.93□□□□□ -0.18
H3F3AP84243 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H3F3AP84243 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.93□□□□□ -0.18
H3F3AP84243 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
H3F3AP84243 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
H3F3AP84243 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H3F3AP84243 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.93□□□□□ -0.18
H3F3AP84243 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
H3F3AP84243 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H3F3AP84243 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
H3F3AP84243 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H3F3AP84243 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3AP84243 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
H3F3AP84243 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3AP84243 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3AP84243 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3AP84243 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.92□□□□□ -0.18
H3F3AP84243 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3AP84243 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3AP84243 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3AP84243 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3AP84243 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3AP84243 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3AP84243 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.92□□□□□ -0.18
H3F3AP84243 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3AP84243 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3AP84243 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
H3F3AP84243 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3AP84243 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
H3F3AP84243 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
H3F3AP84243 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3AP84243 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.92□□□□□ -0.18
H3F3AP84243 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.92□□□□□ -0.18
H3F3AP84243 AC036164.1-201ENST00000570544 333 ntBASIC13.92□□□□□ -0.18
H3F3AP84243 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.92□□□□□ -0.18
H3F3AP84243 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.92□□□□□ -0.18
H3F3AP84243 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3AP84243 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.92□□□□□ -0.18
H3F3AP84243 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.92□□□□□ -0.18
H3F3AP84243 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3AP84243 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3AP84243 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.92□□□□□ -0.18
H3F3AP84243 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.92□□□□□ -0.18
H3F3AP84243 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3AP84243 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3AP84243 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
H3F3AP84243 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3AP84243 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.92□□□□□ -0.18
H3F3AP84243 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3AP84243 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
H3F3AP84243 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3AP84243 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3AP84243 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.92□□□□□ -0.18
H3F3AP84243 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3AP84243 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3AP84243 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
H3F3AP84243 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
H3F3AP84243 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H3F3AP84243 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
H3F3AP84243 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
H3F3AP84243 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H3F3AP84243 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H3F3AP84243 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H3F3AP84243 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
H3F3AP84243 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
H3F3AP84243 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.91□□□□□ -0.18
H3F3AP84243 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
H3F3AP84243 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
H3F3AP84243 C18orf15-201ENST00000623680 2534 ntBASIC13.91□□□□□ -0.18
H3F3AP84243 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.91□□□□□ -0.18
H3F3AP84243 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H3F3AP84243 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
H3F3AP84243 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H3F3AP84243 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
H3F3AP84243 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.91□□□□□ -0.18
H3F3AP84243 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
H3F3AP84243 PIN1P1-201ENST00000412108 996 ntBASIC13.91□□□□□ -0.18
H3F3AP84243 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.91□□□□□ -0.18
H3F3AP84243 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.91□□□□□ -0.18
H3F3AP84243 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.91□□□□□ -0.18
H3F3AP84243 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.91□□□□□ -0.18
H3F3AP84243 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.91□□□□□ -0.18
H3F3AP84243 API5-211ENST00000534695 560 ntTSL 5 BASIC13.91□□□□□ -0.18
H3F3AP84243 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.91□□□□□ -0.18
H3F3AP84243 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms