Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ACTA1P68133 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ACTA1P68133 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ACTA1P68133 AL590627.1-203ENST00000421194 1026 ntBASIC13.93□□□□□ -0.18
ACTA1P68133 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.93□□□□□ -0.18
ACTA1P68133 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC13.93□□□□□ -0.18
ACTA1P68133 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.93□□□□□ -0.18
ACTA1P68133 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ACTA1P68133 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC13.93□□□□□ -0.18
ACTA1P68133 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC13.93□□□□□ -0.18
ACTA1P68133 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ACTA1P68133 AC145285.3-201ENST00000564603 959 ntBASIC13.93□□□□□ -0.18
ACTA1P68133 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.93□□□□□ -0.18
ACTA1P68133 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ACTA1P68133 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC13.93□□□□□ -0.18
ACTA1P68133 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ACTA1P68133 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.93□□□□□ -0.18
ACTA1P68133 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
ACTA1P68133 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
ACTA1P68133 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ACTA1P68133 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ACTA1P68133 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.93□□□□□ -0.18
ACTA1P68133 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ACTA1P68133 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ACTA1P68133 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.93□□□□□ -0.18
ACTA1P68133 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.93□□□□□ -0.18
ACTA1P68133 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.93□□□□□ -0.18
ACTA1P68133 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.93□□□□□ -0.18
ACTA1P68133 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ACTA1P68133 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ACTA1P68133 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.93□□□□□ -0.18
ACTA1P68133 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
ACTA1P68133 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.93□□□□□ -0.18
ACTA1P68133 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ACTA1P68133 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
ACTA1P68133 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ACTA1P68133 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.92□□□□□ -0.18
ACTA1P68133 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ACTA1P68133 AL607033.1-201ENST00000623900 1599 ntBASIC13.92□□□□□ -0.18
ACTA1P68133 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ACTA1P68133 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.92□□□□□ -0.18
ACTA1P68133 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.92□□□□□ -0.18
ACTA1P68133 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
ACTA1P68133 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.92□□□□□ -0.18
ACTA1P68133 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
ACTA1P68133 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ACTA1P68133 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.92□□□□□ -0.18
ACTA1P68133 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.92□□□□□ -0.18
ACTA1P68133 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
ACTA1P68133 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
ACTA1P68133 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ACTA1P68133 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.92□□□□□ -0.18
ACTA1P68133 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ACTA1P68133 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ACTA1P68133 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ACTA1P68133 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
ACTA1P68133 TFAMP1-201ENST00000412727 736 ntBASIC13.92□□□□□ -0.18
ACTA1P68133 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.92□□□□□ -0.18
ACTA1P68133 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.92□□□□□ -0.18
ACTA1P68133 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC13.92□□□□□ -0.18
ACTA1P68133 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.92□□□□□ -0.18
ACTA1P68133 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.92□□□□□ -0.18
ACTA1P68133 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.92□□□□□ -0.18
ACTA1P68133 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC13.92□□□□□ -0.18
ACTA1P68133 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ACTA1P68133 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.92□□□□□ -0.18
ACTA1P68133 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
ACTA1P68133 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ACTA1P68133 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
ACTA1P68133 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ACTA1P68133 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.92□□□□□ -0.18
ACTA1P68133 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ACTA1P68133 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ACTA1P68133 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.92□□□□□ -0.18
ACTA1P68133 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ACTA1P68133 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.92□□□□□ -0.18
ACTA1P68133 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.92□□□□□ -0.18
ACTA1P68133 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
ACTA1P68133 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.92□□□□□ -0.18
ACTA1P68133 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ACTA1P68133 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.92□□□□□ -0.18
ACTA1P68133 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ACTA1P68133 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ACTA1P68133 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.92□□□□□ -0.18
ACTA1P68133 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.92□□□□□ -0.18
ACTA1P68133 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
ACTA1P68133 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ACTA1P68133 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ACTA1P68133 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ACTA1P68133 IL9RP2-201ENST00000423948 1312 ntBASIC13.91□□□□□ -0.18
ACTA1P68133 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.91□□□□□ -0.18
ACTA1P68133 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
ACTA1P68133 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
ACTA1P68133 AC104109.2-201ENST00000602919 1418 ntBASIC13.91□□□□□ -0.18
ACTA1P68133 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ACTA1P68133 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ACTA1P68133 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ACTA1P68133 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ACTA1P68133 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ACTA1P68133 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms