Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5BP61020 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
RAB5BP61020 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.2□□□□□ -0.46
RAB5BP61020 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5BP61020 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5BP61020 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5BP61020 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5BP61020 DGCR5-203ENST00000438934 5492 ntTSL 5 BASIC12.2□□□□□ -0.46
RAB5BP61020 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.2□□□□□ -0.46
RAB5BP61020 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5BP61020 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5BP61020 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5BP61020 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
RAB5BP61020 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
RAB5BP61020 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5BP61020 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5BP61020 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5BP61020 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC12.2□□□□□ -0.46
RAB5BP61020 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5BP61020 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.2□□□□□ -0.46
RAB5BP61020 AL365181.3-201ENST00000605886 3222 ntBASIC12.2□□□□□ -0.46
RAB5BP61020 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC12.2□□□□□ -0.46
RAB5BP61020 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5BP61020 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
RAB5BP61020 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC12.2□□□□□ -0.46
RAB5BP61020 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
RAB5BP61020 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC12.2□□□□□ -0.46
RAB5BP61020 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC12.2□□□□□ -0.46
RAB5BP61020 TMEM198B-204ENST00000484016 896 ntBASIC12.2□□□□□ -0.46
RAB5BP61020 FDX2-207ENST00000494368 584 ntTSL 4 BASIC12.2□□□□□ -0.46
RAB5BP61020 LY6E-205ENST00000519611 635 ntTSL 3 BASIC12.2□□□□□ -0.46
RAB5BP61020 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
RAB5BP61020 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC12.2□□□□□ -0.46
RAB5BP61020 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5BP61020 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC12.2□□□□□ -0.46
RAB5BP61020 AC073195.1-201ENST00000607241 877 ntBASIC12.2□□□□□ -0.46
RAB5BP61020 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
RAB5BP61020 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.2□□□□□ -0.46
RAB5BP61020 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5BP61020 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
RAB5BP61020 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC12.2□□□□□ -0.46
RAB5BP61020 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5BP61020 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.2□□□□□ -0.46
RAB5BP61020 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
RAB5BP61020 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5BP61020 TBC1D3P5-201ENST00000579401 1545 ntBASIC12.2□□□□□ -0.46
RAB5BP61020 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC12.2□□□□□ -0.46
RAB5BP61020 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5BP61020 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.2□□□□□ -0.46
RAB5BP61020 KRT89P-201ENST00000620027 1478 ntBASIC12.2□□□□□ -0.46
RAB5BP61020 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5BP61020 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5BP61020 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5BP61020 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
RAB5BP61020 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5BP61020 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
RAB5BP61020 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
RAB5BP61020 AL805961.2-201ENST00000642139 4817 ntBASIC12.2□□□□□ -0.46
RAB5BP61020 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5BP61020 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5BP61020 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5BP61020 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5BP61020 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC12.19□□□□□ -0.46
RAB5BP61020 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC12.19□□□□□ -0.46
RAB5BP61020 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5BP61020 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5BP61020 BX324167.2-201ENST00000623717 3316 ntBASIC12.19□□□□□ -0.46
RAB5BP61020 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.19□□□□□ -0.46
RAB5BP61020 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC12.19□□□□□ -0.46
RAB5BP61020 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
RAB5BP61020 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5BP61020 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.19□□□□□ -0.46
RAB5BP61020 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
RAB5BP61020 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
RAB5BP61020 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
RAB5BP61020 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5BP61020 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5BP61020 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5BP61020 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
RAB5BP61020 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
RAB5BP61020 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC12.19□□□□□ -0.46
RAB5BP61020 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5BP61020 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5BP61020 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5BP61020 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC12.19□□□□□ -0.46
RAB5BP61020 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
RAB5BP61020 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC12.19□□□□□ -0.46
RAB5BP61020 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC12.19□□□□□ -0.46
RAB5BP61020 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5BP61020 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC12.19□□□□□ -0.46
RAB5BP61020 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC12.19□□□□□ -0.46
RAB5BP61020 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC12.19□□□□□ -0.46
RAB5BP61020 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC12.19□□□□□ -0.46
RAB5BP61020 AC092865.7-201ENST00000641832 219 ntBASIC12.19□□□□□ -0.46
RAB5BP61020 AL592424.1-201ENST00000563624 1536 ntBASIC12.19□□□□□ -0.46
RAB5BP61020 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5BP61020 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5BP61020 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5BP61020 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5BP61020 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms