Protein–RNA interactions for Protein: P58499

FAM3B, Protein FAM3B, humanhuman

Predicted RBP Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3BP58499 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
FAM3BP58499 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.24□□□□□ -0.45
FAM3BP58499 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
FAM3BP58499 AC005562.1-201ENST00000583030 3219 ntBASIC12.24□□□□□ -0.45
FAM3BP58499 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
FAM3BP58499 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
FAM3BP58499 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
FAM3BP58499 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
FAM3BP58499 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
FAM3BP58499 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
FAM3BP58499 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
FAM3BP58499 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
FAM3BP58499 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
FAM3BP58499 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
FAM3BP58499 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
FAM3BP58499 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
FAM3BP58499 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
FAM3BP58499 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
FAM3BP58499 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC12.24□□□□□ -0.45
FAM3BP58499 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC12.24□□□□□ -0.45
FAM3BP58499 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC12.24□□□□□ -0.45
FAM3BP58499 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
FAM3BP58499 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
FAM3BP58499 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
FAM3BP58499 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
FAM3BP58499 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
FAM3BP58499 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
FAM3BP58499 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.24□□□□□ -0.45
FAM3BP58499 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
FAM3BP58499 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
FAM3BP58499 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
FAM3BP58499 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
FAM3BP58499 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
FAM3BP58499 AL031284.1-201ENST00000419297 478 ntBASIC12.24□□□□□ -0.45
FAM3BP58499 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
FAM3BP58499 PMS2P1-201ENST00000431037 1228 ntBASIC12.24□□□□□ -0.45
FAM3BP58499 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
FAM3BP58499 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC12.24□□□□□ -0.45
FAM3BP58499 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
FAM3BP58499 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
FAM3BP58499 RBSN-204ENST00000449050 903 ntTSL 2 BASIC12.24□□□□□ -0.45
FAM3BP58499 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
FAM3BP58499 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC12.24□□□□□ -0.45
FAM3BP58499 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC12.24□□□□□ -0.45
FAM3BP58499 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC12.24□□□□□ -0.45
FAM3BP58499 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
FAM3BP58499 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC12.24□□□□□ -0.45
FAM3BP58499 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
FAM3BP58499 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
FAM3BP58499 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.24□□□□□ -0.45
FAM3BP58499 MTDHP3-201ENST00000594186 672 ntBASIC12.24□□□□□ -0.45
FAM3BP58499 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
FAM3BP58499 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.24□□□□□ -0.45
FAM3BP58499 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
FAM3BP58499 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.24□□□□□ -0.45
FAM3BP58499 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC12.24□□□□□ -0.45
FAM3BP58499 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
FAM3BP58499 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
FAM3BP58499 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
FAM3BP58499 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
FAM3BP58499 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
FAM3BP58499 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
FAM3BP58499 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC12.24□□□□□ -0.45
FAM3BP58499 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
FAM3BP58499 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.24□□□□□ -0.45
FAM3BP58499 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.23□□□□□ -0.45
FAM3BP58499 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
FAM3BP58499 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
FAM3BP58499 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.23□□□□□ -0.45
FAM3BP58499 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.23□□□□□ -0.45
FAM3BP58499 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
FAM3BP58499 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.23□□□□□ -0.45
FAM3BP58499 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
FAM3BP58499 AC005622.1-201ENST00000636801 1703 ntBASIC12.23□□□□□ -0.45
FAM3BP58499 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
FAM3BP58499 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
FAM3BP58499 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
FAM3BP58499 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.23□□□□□ -0.45
FAM3BP58499 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.23□□□□□ -0.45
FAM3BP58499 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC12.23□□□□□ -0.45
FAM3BP58499 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC12.23□□□□□ -0.45
FAM3BP58499 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
FAM3BP58499 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
FAM3BP58499 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
FAM3BP58499 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
FAM3BP58499 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
FAM3BP58499 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC12.23□□□□□ -0.45
FAM3BP58499 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
FAM3BP58499 AP005117.1-201ENST00000584346 1413 ntBASIC12.23□□□□□ -0.45
FAM3BP58499 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
FAM3BP58499 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
FAM3BP58499 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
FAM3BP58499 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
FAM3BP58499 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
FAM3BP58499 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
FAM3BP58499 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
FAM3BP58499 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC12.23□□□□□ -0.45
FAM3BP58499 MRPL3P1-201ENST00000400109 1033 ntBASIC12.23□□□□□ -0.45
FAM3BP58499 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC12.23□□□□□ -0.45
FAM3BP58499 AL590627.1-203ENST00000421194 1026 ntBASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms