Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.93□□□□□ -0.02
VSX2P58304 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
VSX2P58304 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
VSX2P58304 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VSX2P58304 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VSX2P58304 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.93□□□□□ -0.02
VSX2P58304 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
VSX2P58304 AP006294.1-201ENST00000415407 339 ntBASIC14.93□□□□□ -0.02
VSX2P58304 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.93□□□□□ -0.02
VSX2P58304 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VSX2P58304 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.93□□□□□ -0.02
VSX2P58304 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.93□□□□□ -0.02
VSX2P58304 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
VSX2P58304 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VSX2P58304 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
VSX2P58304 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.93□□□□□ -0.02
VSX2P58304 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.93□□□□□ -0.02
VSX2P58304 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.93□□□□□ -0.02
VSX2P58304 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.93□□□□□ -0.02
VSX2P58304 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.93□□□□□ -0.02
VSX2P58304 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VSX2P58304 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VSX2P58304 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
VSX2P58304 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VSX2P58304 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VSX2P58304 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.93□□□□□ -0.02
VSX2P58304 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VSX2P58304 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VSX2P58304 NORAD-201ENST00000565493 5339 ntBASIC14.93□□□□□ -0.02
VSX2P58304 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.93□□□□□ -0.02
VSX2P58304 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VSX2P58304 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
VSX2P58304 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VSX2P58304 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VSX2P58304 AC067930.6-201ENST00000623257 4947 ntBASIC14.92□□□□□ -0.02
VSX2P58304 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
VSX2P58304 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.92□□□□□ -0.02
VSX2P58304 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VSX2P58304 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
VSX2P58304 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
VSX2P58304 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VSX2P58304 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VSX2P58304 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VSX2P58304 LINC02228-204ENST00000642115 2962 ntBASIC14.92□□□□□ -0.02
VSX2P58304 AC127383.1-201ENST00000444697 1800 ntBASIC14.92□□□□□ -0.02
VSX2P58304 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
VSX2P58304 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.92□□□□□ -0.02
VSX2P58304 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VSX2P58304 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
VSX2P58304 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VSX2P58304 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.92□□□□□ -0.02
VSX2P58304 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
VSX2P58304 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.92□□□□□ -0.02
VSX2P58304 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VSX2P58304 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.92□□□□□ -0.02
VSX2P58304 AL133267.1-201ENST00000398220 340 ntBASIC14.92□□□□□ -0.02
VSX2P58304 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.92□□□□□ -0.02
VSX2P58304 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.92□□□□□ -0.02
VSX2P58304 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.92□□□□□ -0.02
VSX2P58304 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.92□□□□□ -0.02
VSX2P58304 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.92□□□□□ -0.02
VSX2P58304 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.92□□□□□ -0.02
VSX2P58304 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VSX2P58304 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.92□□□□□ -0.02
VSX2P58304 AC092552.1-201ENST00000547243 906 ntBASIC14.92□□□□□ -0.02
VSX2P58304 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.92□□□□□ -0.02
VSX2P58304 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.92□□□□□ -0.02
VSX2P58304 AC015910.1-201ENST00000579400 975 ntBASIC14.92□□□□□ -0.02
VSX2P58304 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.92□□□□□ -0.02
VSX2P58304 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VSX2P58304 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.92□□□□□ -0.02
VSX2P58304 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.92□□□□□ -0.02
VSX2P58304 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
VSX2P58304 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.92□□□□□ -0.02
VSX2P58304 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.92□□□□□ -0.02
VSX2P58304 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
VSX2P58304 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.92□□□□□ -0.02
VSX2P58304 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
VSX2P58304 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VSX2P58304 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VSX2P58304 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VSX2P58304 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VSX2P58304 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VSX2P58304 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
VSX2P58304 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VSX2P58304 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.92□□□□□ -0.02
VSX2P58304 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.92□□□□□ -0.02
VSX2P58304 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VSX2P58304 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VSX2P58304 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.92□□□□□ -0.02
VSX2P58304 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.92□□□□□ -0.02
VSX2P58304 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.92□□□□□ -0.02
VSX2P58304 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VSX2P58304 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VSX2P58304 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VSX2P58304 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VSX2P58304 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VSX2P58304 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VSX2P58304 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
VSX2P58304 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms