Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CLDN6P56747 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN6P56747 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
CLDN6P56747 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.9□□□□□ -0.02
CLDN6P56747 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CLDN6P56747 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN6P56747 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
CLDN6P56747 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
CLDN6P56747 AC138028.6-201ENST00000616106 1482 ntBASIC14.9□□□□□ -0.02
CLDN6P56747 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN6P56747 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.9□□□□□ -0.02
CLDN6P56747 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN6P56747 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN6P56747 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.9□□□□□ -0.02
CLDN6P56747 FXNP2-201ENST00000411625 547 ntBASIC14.9□□□□□ -0.02
CLDN6P56747 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.9□□□□□ -0.02
CLDN6P56747 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.9□□□□□ -0.02
CLDN6P56747 BX284668.4-201ENST00000453917 508 ntBASIC14.9□□□□□ -0.02
CLDN6P56747 UPF3AP2-201ENST00000457924 1132 ntBASIC14.9□□□□□ -0.02
CLDN6P56747 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN6P56747 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN6P56747 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC14.9□□□□□ -0.02
CLDN6P56747 KRT18P25-201ENST00000508931 1278 ntBASIC14.9□□□□□ -0.02
CLDN6P56747 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN6P56747 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.9□□□□□ -0.02
CLDN6P56747 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.9□□□□□ -0.02
CLDN6P56747 EEF1DP1-201ENST00000585891 896 ntBASIC14.9□□□□□ -0.02
CLDN6P56747 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC14.9□□□□□ -0.02
CLDN6P56747 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CLDN6P56747 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.9□□□□□ -0.02
CLDN6P56747 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CLDN6P56747 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN6P56747 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN6P56747 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
CLDN6P56747 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN6P56747 AC046158.3-201ENST00000624947 2558 ntBASIC14.9□□□□□ -0.02
CLDN6P56747 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN6P56747 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN6P56747 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN6P56747 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN6P56747 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN6P56747 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN6P56747 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
CLDN6P56747 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.9□□□□□ -0.02
CLDN6P56747 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.9□□□□□ -0.02
CLDN6P56747 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.9□□□□□ -0.02
CLDN6P56747 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN6P56747 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.9□□□□□ -0.02
CLDN6P56747 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CLDN6P56747 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN6P56747 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN6P56747 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN6P56747 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN6P56747 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN6P56747 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN6P56747 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN6P56747 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN6P56747 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN6P56747 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN6P56747 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN6P56747 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN6P56747 AC015818.8-201ENST00000587907 1519 ntBASIC14.89□□□□□ -0.03
CLDN6P56747 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CLDN6P56747 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN6P56747 RNU1-114P-201ENST00000365297 166 ntBASIC14.89□□□□□ -0.03
CLDN6P56747 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN6P56747 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CLDN6P56747 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.89□□□□□ -0.03
CLDN6P56747 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN6P56747 HINT2P1-201ENST00000419438 481 ntBASIC14.89□□□□□ -0.03
CLDN6P56747 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN6P56747 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.89□□□□□ -0.03
CLDN6P56747 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC14.89□□□□□ -0.03
CLDN6P56747 AC004898.1-201ENST00000451057 766 ntBASIC14.89□□□□□ -0.03
CLDN6P56747 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC14.89□□□□□ -0.03
CLDN6P56747 RNA5SP486-201ENST00000515961 83 ntBASIC14.89□□□□□ -0.03
CLDN6P56747 CHMP4BP1-201ENST00000556017 588 ntBASIC14.89□□□□□ -0.03
CLDN6P56747 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN6P56747 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.89□□□□□ -0.03
CLDN6P56747 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.89□□□□□ -0.03
CLDN6P56747 AP005019.2-201ENST00000615104 511 ntBASIC14.89□□□□□ -0.03
CLDN6P56747 MIR6727-201ENST00000620702 65 ntBASIC14.89□□□□□ -0.03
CLDN6P56747 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN6P56747 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN6P56747 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN6P56747 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CLDN6P56747 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN6P56747 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CLDN6P56747 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN6P56747 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN6P56747 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CLDN6P56747 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CLDN6P56747 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.89□□□□□ -0.03
CLDN6P56747 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.89□□□□□ -0.03
CLDN6P56747 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.89□□□□□ -0.03
CLDN6P56747 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN6P56747 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CLDN6P56747 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CLDN6P56747 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CLDN6P56747 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms