Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.06□□□□□ -0.16
SUMO3P55854 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SUMO3P55854 AC140912.1-201ENST00000577171 1054 ntBASIC14.06□□□□□ -0.16
SUMO3P55854 TMEM261P1-201ENST00000604899 340 ntBASIC14.06□□□□□ -0.16
SUMO3P55854 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
SUMO3P55854 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SUMO3P55854 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SUMO3P55854 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SUMO3P55854 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SUMO3P55854 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SUMO3P55854 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.06□□□□□ -0.16
SUMO3P55854 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SUMO3P55854 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SUMO3P55854 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SUMO3P55854 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SUMO3P55854 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SUMO3P55854 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SUMO3P55854 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SUMO3P55854 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
SUMO3P55854 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SUMO3P55854 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SUMO3P55854 AC023024.2-201ENST00000623561 1993 ntBASIC14.05□□□□□ -0.16
SUMO3P55854 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
SUMO3P55854 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SUMO3P55854 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SUMO3P55854 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SUMO3P55854 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
SUMO3P55854 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SUMO3P55854 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SUMO3P55854 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SUMO3P55854 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SUMO3P55854 AC013268.4-201ENST00000637413 2228 ntBASIC14.05□□□□□ -0.16
SUMO3P55854 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SUMO3P55854 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SUMO3P55854 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SUMO3P55854 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SUMO3P55854 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SUMO3P55854 AC134915.1-201ENST00000426461 574 ntBASIC14.05□□□□□ -0.16
SUMO3P55854 VDAC1P7-201ENST00000462417 847 ntBASIC14.05□□□□□ -0.16
SUMO3P55854 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.05□□□□□ -0.16
SUMO3P55854 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.05□□□□□ -0.16
SUMO3P55854 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.05□□□□□ -0.16
SUMO3P55854 API5-211ENST00000534695 560 ntTSL 5 BASIC14.05□□□□□ -0.16
SUMO3P55854 AC092552.1-201ENST00000547243 906 ntBASIC14.05□□□□□ -0.16
SUMO3P55854 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.05□□□□□ -0.16
SUMO3P55854 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.05□□□□□ -0.16
SUMO3P55854 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.05□□□□□ -0.16
SUMO3P55854 AC120045.2-201ENST00000567334 178 ntBASIC14.05□□□□□ -0.16
SUMO3P55854 SAMD11P1-201ENST00000571429 661 ntBASIC14.05□□□□□ -0.16
SUMO3P55854 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.05□□□□□ -0.16
SUMO3P55854 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.05□□□□□ -0.16
SUMO3P55854 AC107373.2-201ENST00000607735 490 ntBASIC14.05□□□□□ -0.16
SUMO3P55854 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.05□□□□□ -0.16
SUMO3P55854 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.05□□□□□ -0.16
SUMO3P55854 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.05□□□□□ -0.16
SUMO3P55854 AC007431.3-201ENST00000623221 587 ntBASIC14.05□□□□□ -0.16
SUMO3P55854 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.05□□□□□ -0.16
SUMO3P55854 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SUMO3P55854 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SUMO3P55854 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.05□□□□□ -0.16
SUMO3P55854 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SUMO3P55854 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SUMO3P55854 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SUMO3P55854 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SUMO3P55854 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.05□□□□□ -0.16
SUMO3P55854 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.05□□□□□ -0.16
SUMO3P55854 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SUMO3P55854 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.05□□□□□ -0.16
SUMO3P55854 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SUMO3P55854 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SUMO3P55854 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
SUMO3P55854 AC012508.2-201ENST00000567613 1472 ntBASIC14.05□□□□□ -0.16
SUMO3P55854 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.05□□□□□ -0.16
SUMO3P55854 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.05□□□□□ -0.16
SUMO3P55854 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SUMO3P55854 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
SUMO3P55854 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
SUMO3P55854 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SUMO3P55854 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.04□□□□□ -0.16
SUMO3P55854 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SUMO3P55854 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SUMO3P55854 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SUMO3P55854 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SUMO3P55854 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SUMO3P55854 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.04□□□□□ -0.16
SUMO3P55854 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
SUMO3P55854 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
SUMO3P55854 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SUMO3P55854 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SUMO3P55854 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.04□□□□□ -0.16
SUMO3P55854 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SUMO3P55854 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SUMO3P55854 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SUMO3P55854 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SUMO3P55854 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SUMO3P55854 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.04□□□□□ -0.16
SUMO3P55854 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.04□□□□□ -0.16
SUMO3P55854 AL645937.2-201ENST00000396808 931 ntBASIC14.04□□□□□ -0.16
SUMO3P55854 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SUMO3P55854 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms