Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH13P55290 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
CDH13P55290 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.28■□□□□ 0.04
CDH13P55290 SPDYE17-201ENST00000412399 783 ntBASIC15.28■□□□□ 0.04
CDH13P55290 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH13P55290 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.28■□□□□ 0.04
CDH13P55290 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.28■□□□□ 0.04
CDH13P55290 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH13P55290 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH13P55290 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.28■□□□□ 0.04
CDH13P55290 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.28■□□□□ 0.04
CDH13P55290 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH13P55290 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH13P55290 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CDH13P55290 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH13P55290 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH13P55290 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH13P55290 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH13P55290 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.28■□□□□ 0.04
CDH13P55290 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH13P55290 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CDH13P55290 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH13P55290 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH13P55290 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH13P55290 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH13P55290 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
CDH13P55290 AC023908.3-201ENST00000564211 3047 ntBASIC15.27■□□□□ 0.04
CDH13P55290 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CDH13P55290 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH13P55290 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH13P55290 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CDH13P55290 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH13P55290 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH13P55290 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDH13P55290 LINC01101-201ENST00000622953 1884 ntBASIC15.27■□□□□ 0.04
CDH13P55290 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH13P55290 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH13P55290 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH13P55290 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDH13P55290 AC013726.1-201ENST00000563747 2285 ntBASIC15.27■□□□□ 0.04
CDH13P55290 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH13P55290 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.27■□□□□ 0.04
CDH13P55290 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH13P55290 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CDH13P55290 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH13P55290 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CDH13P55290 FO393414.2-201ENST00000405153 598 ntBASIC15.27■□□□□ 0.04
CDH13P55290 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDH13P55290 AC112482.1-201ENST00000492080 688 ntBASIC15.27■□□□□ 0.04
CDH13P55290 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH13P55290 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CDH13P55290 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
CDH13P55290 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.27■□□□□ 0.04
CDH13P55290 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDH13P55290 AC010327.4-202ENST00000591484 748 ntBASIC15.27■□□□□ 0.04
CDH13P55290 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH13P55290 AJ011931.1-201ENST00000618749 2492 ntBASIC15.27■□□□□ 0.03
CDH13P55290 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
CDH13P55290 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CDH13P55290 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH13P55290 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CDH13P55290 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH13P55290 AC084364.1-201ENST00000551967 1556 ntBASIC15.27■□□□□ 0.03
CDH13P55290 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH13P55290 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CDH13P55290 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH13P55290 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CDH13P55290 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CDH13P55290 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CDH13P55290 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH13P55290 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH13P55290 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH13P55290 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH13P55290 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH13P55290 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH13P55290 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH13P55290 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH13P55290 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH13P55290 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.26■□□□□ 0.03
CDH13P55290 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH13P55290 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH13P55290 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.26■□□□□ 0.03
CDH13P55290 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH13P55290 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH13P55290 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.26■□□□□ 0.03
CDH13P55290 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH13P55290 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH13P55290 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.26■□□□□ 0.03
CDH13P55290 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CDH13P55290 TARDBPP1-201ENST00000442013 1203 ntBASIC15.26■□□□□ 0.03
CDH13P55290 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.26■□□□□ 0.03
CDH13P55290 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH13P55290 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.26■□□□□ 0.03
CDH13P55290 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CDH13P55290 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.26■□□□□ 0.03
CDH13P55290 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH13P55290 MIR4453-201ENST00000584019 89 ntBASIC15.26■□□□□ 0.03
CDH13P55290 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH13P55290 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CDH13P55290 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms