Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.97■□□□□ 0.31
NCKAP1LP55160 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.97■□□□□ 0.31
NCKAP1LP55160 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NCKAP1LP55160 SAMD11P1-201ENST00000571429 661 ntBASIC16.97■□□□□ 0.31
NCKAP1LP55160 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.97■□□□□ 0.31
NCKAP1LP55160 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
NCKAP1LP55160 RPSAP52-203ENST00000622976 1023 ntBASIC16.97■□□□□ 0.31
NCKAP1LP55160 AL358472.5-202ENST00000641448 1267 ntBASIC16.97■□□□□ 0.31
NCKAP1LP55160 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NCKAP1LP55160 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NCKAP1LP55160 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NCKAP1LP55160 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.97■□□□□ 0.31
NCKAP1LP55160 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NCKAP1LP55160 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NCKAP1LP55160 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NCKAP1LP55160 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NCKAP1LP55160 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NCKAP1LP55160 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.96■□□□□ 0.31
NCKAP1LP55160 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NCKAP1LP55160 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NCKAP1LP55160 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NCKAP1LP55160 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NCKAP1LP55160 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
NCKAP1LP55160 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.96■□□□□ 0.31
NCKAP1LP55160 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
NCKAP1LP55160 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
NCKAP1LP55160 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NCKAP1LP55160 AC103702.1-201ENST00000548801 2630 ntBASIC16.96■□□□□ 0.31
NCKAP1LP55160 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.96■□□□□ 0.31
NCKAP1LP55160 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NCKAP1LP55160 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.96■□□□□ 0.31
NCKAP1LP55160 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.96■□□□□ 0.31
NCKAP1LP55160 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.96■□□□□ 0.31
NCKAP1LP55160 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.96■□□□□ 0.31
NCKAP1LP55160 AC004066.1-201ENST00000502488 802 ntBASIC16.96■□□□□ 0.31
NCKAP1LP55160 ENPP7P5-201ENST00000541031 1031 ntBASIC16.96■□□□□ 0.31
NCKAP1LP55160 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.96■□□□□ 0.31
NCKAP1LP55160 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.96■□□□□ 0.31
NCKAP1LP55160 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.96■□□□□ 0.31
NCKAP1LP55160 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.96■□□□□ 0.31
NCKAP1LP55160 AC005252.2-201ENST00000624630 1141 ntBASIC16.96■□□□□ 0.31
NCKAP1LP55160 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.96■□□□□ 0.31
NCKAP1LP55160 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
NCKAP1LP55160 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.96■□□□□ 0.31
NCKAP1LP55160 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
NCKAP1LP55160 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
NCKAP1LP55160 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NCKAP1LP55160 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NCKAP1LP55160 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
NCKAP1LP55160 AC104640.1-201ENST00000562617 2109 ntBASIC16.96■□□□□ 0.3
NCKAP1LP55160 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
NCKAP1LP55160 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
NCKAP1LP55160 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.95■□□□□ 0.3
NCKAP1LP55160 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
NCKAP1LP55160 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NCKAP1LP55160 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NCKAP1LP55160 AC007787.1-201ENST00000588095 1583 ntBASIC16.95■□□□□ 0.3
NCKAP1LP55160 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NCKAP1LP55160 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NCKAP1LP55160 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
NCKAP1LP55160 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
NCKAP1LP55160 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NCKAP1LP55160 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NCKAP1LP55160 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
NCKAP1LP55160 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
NCKAP1LP55160 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.95■□□□□ 0.3
NCKAP1LP55160 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
NCKAP1LP55160 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
NCKAP1LP55160 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.95■□□□□ 0.3
NCKAP1LP55160 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.95■□□□□ 0.3
NCKAP1LP55160 CLUHP6-201ENST00000580789 941 ntBASIC16.95■□□□□ 0.3
NCKAP1LP55160 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.95■□□□□ 0.3
NCKAP1LP55160 CU634019.7-201ENST00000624153 1185 ntBASIC16.95■□□□□ 0.3
NCKAP1LP55160 FP236241.2-201ENST00000624906 1185 ntBASIC16.95■□□□□ 0.3
NCKAP1LP55160 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.95■□□□□ 0.3
NCKAP1LP55160 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NCKAP1LP55160 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
NCKAP1LP55160 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NCKAP1LP55160 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NCKAP1LP55160 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NCKAP1LP55160 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NCKAP1LP55160 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NCKAP1LP55160 AC006486.2-201ENST00000624246 2199 ntBASIC16.95■□□□□ 0.3
NCKAP1LP55160 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
NCKAP1LP55160 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
NCKAP1LP55160 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
NCKAP1LP55160 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.95■□□□□ 0.3
NCKAP1LP55160 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.95■□□□□ 0.3
NCKAP1LP55160 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NCKAP1LP55160 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NCKAP1LP55160 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
NCKAP1LP55160 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NCKAP1LP55160 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.94■□□□□ 0.3
NCKAP1LP55160 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
NCKAP1LP55160 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NCKAP1LP55160 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NCKAP1LP55160 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NCKAP1LP55160 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.94■□□□□ 0.3
NCKAP1LP55160 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NCKAP1LP55160 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms