Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ATXN3P54252 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
ATXN3P54252 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
ATXN3P54252 KRT43P-201ENST00000434019 910 ntBASIC16.01■□□□□ 0.15
ATXN3P54252 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.01■□□□□ 0.15
ATXN3P54252 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.01■□□□□ 0.15
ATXN3P54252 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.01■□□□□ 0.15
ATXN3P54252 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.01■□□□□ 0.15
ATXN3P54252 TIMM17BP1-201ENST00000545713 516 ntBASIC16.01■□□□□ 0.15
ATXN3P54252 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16.01■□□□□ 0.15
ATXN3P54252 AC023310.3-201ENST00000557027 670 ntBASIC16.01■□□□□ 0.15
ATXN3P54252 AC100756.1-201ENST00000562736 682 ntBASIC16.01■□□□□ 0.15
ATXN3P54252 AC138749.3-201ENST00000567691 622 ntBASIC16.01■□□□□ 0.15
ATXN3P54252 MIR4525-201ENST00000580000 75 ntBASIC16.01■□□□□ 0.15
ATXN3P54252 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.01■□□□□ 0.15
ATXN3P54252 AC116165.1-201ENST00000611806 668 ntBASIC16.01■□□□□ 0.15
ATXN3P54252 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ATXN3P54252 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.01■□□□□ 0.15
ATXN3P54252 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.01■□□□□ 0.15
ATXN3P54252 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATXN3P54252 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATXN3P54252 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATXN3P54252 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATXN3P54252 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATXN3P54252 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.01■□□□□ 0.15
ATXN3P54252 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ATXN3P54252 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
ATXN3P54252 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ATXN3P54252 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.01■□□□□ 0.15
ATXN3P54252 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ATXN3P54252 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.01■□□□□ 0.15
ATXN3P54252 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16■□□□□ 0.15
ATXN3P54252 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16■□□□□ 0.15
ATXN3P54252 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
ATXN3P54252 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
ATXN3P54252 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16■□□□□ 0.15
ATXN3P54252 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16■□□□□ 0.15
ATXN3P54252 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16■□□□□ 0.15
ATXN3P54252 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
ATXN3P54252 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16■□□□□ 0.15
ATXN3P54252 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16■□□□□ 0.15
ATXN3P54252 AL671710.1-201ENST00000610245 2349 ntBASIC16■□□□□ 0.15
ATXN3P54252 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATXN3P54252 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
ATXN3P54252 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16■□□□□ 0.15
ATXN3P54252 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16■□□□□ 0.15
ATXN3P54252 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATXN3P54252 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATXN3P54252 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
ATXN3P54252 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
ATXN3P54252 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16■□□□□ 0.15
ATXN3P54252 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATXN3P54252 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16■□□□□ 0.15
ATXN3P54252 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16■□□□□ 0.15
ATXN3P54252 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16■□□□□ 0.15
ATXN3P54252 ELK1P1-201ENST00000485699 580 ntBASIC16■□□□□ 0.15
ATXN3P54252 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
ATXN3P54252 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATXN3P54252 AC092552.1-201ENST00000547243 906 ntBASIC16■□□□□ 0.15
ATXN3P54252 CTBP2P3-201ENST00000585629 1255 ntBASIC16■□□□□ 0.15
ATXN3P54252 AC004790.1-201ENST00000612686 536 ntBASIC16■□□□□ 0.15
ATXN3P54252 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16■□□□□ 0.15
ATXN3P54252 AL033527.4-201ENST00000641026 673 ntBASIC16■□□□□ 0.15
ATXN3P54252 AL109936.8-201ENST00000641772 604 ntBASIC16■□□□□ 0.15
ATXN3P54252 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16■□□□□ 0.15
ATXN3P54252 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16■□□□□ 0.15
ATXN3P54252 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
ATXN3P54252 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
ATXN3P54252 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16■□□□□ 0.15
ATXN3P54252 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
ATXN3P54252 AC006277.1-201ENST00000624348 1610 ntBASIC16■□□□□ 0.15
ATXN3P54252 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
ATXN3P54252 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
ATXN3P54252 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATXN3P54252 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATXN3P54252 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATXN3P54252 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16■□□□□ 0.15
ATXN3P54252 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATXN3P54252 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
ATXN3P54252 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16■□□□□ 0.15
ATXN3P54252 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.99■□□□□ 0.15
ATXN3P54252 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATXN3P54252 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
ATXN3P54252 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.99■□□□□ 0.15
ATXN3P54252 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ATXN3P54252 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATXN3P54252 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
ATXN3P54252 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ATXN3P54252 TNRC18P2-201ENST00000417666 2714 ntBASIC15.99■□□□□ 0.15
ATXN3P54252 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATXN3P54252 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATXN3P54252 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.99■□□□□ 0.15
ATXN3P54252 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
ATXN3P54252 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
ATXN3P54252 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATXN3P54252 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.99■□□□□ 0.15
ATXN3P54252 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATXN3P54252 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATXN3P54252 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
ATXN3P54252 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms