Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.01■□□□□ 0.31
CLCN3P51790 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.01■□□□□ 0.31
CLCN3P51790 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.01■□□□□ 0.31
CLCN3P51790 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.01■□□□□ 0.31
CLCN3P51790 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.01■□□□□ 0.31
CLCN3P51790 MIR6799-201ENST00000620297 69 ntBASIC17.01■□□□□ 0.31
CLCN3P51790 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.01■□□□□ 0.31
CLCN3P51790 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLCN3P51790 AC148477.4-201ENST00000613430 1793 ntBASIC17.01■□□□□ 0.31
CLCN3P51790 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
CLCN3P51790 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLCN3P51790 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CLCN3P51790 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLCN3P51790 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLCN3P51790 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.01■□□□□ 0.31
CLCN3P51790 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLCN3P51790 TNRC18P3-201ENST00000441896 2691 ntBASIC17.01■□□□□ 0.31
CLCN3P51790 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.01■□□□□ 0.31
CLCN3P51790 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.01■□□□□ 0.31
CLCN3P51790 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLCN3P51790 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.01■□□□□ 0.31
CLCN3P51790 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CLCN3P51790 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLCN3P51790 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLCN3P51790 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLCN3P51790 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17■□□□□ 0.31
CLCN3P51790 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
CLCN3P51790 AC105250.1-201ENST00000509378 2057 ntBASIC17■□□□□ 0.31
CLCN3P51790 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLCN3P51790 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CLCN3P51790 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
CLCN3P51790 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CLCN3P51790 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLCN3P51790 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CLCN3P51790 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CLCN3P51790 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLCN3P51790 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17■□□□□ 0.31
CLCN3P51790 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLCN3P51790 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17■□□□□ 0.31
CLCN3P51790 FAM197Y7-201ENST00000432892 766 ntBASIC17■□□□□ 0.31
CLCN3P51790 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17■□□□□ 0.31
CLCN3P51790 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17■□□□□ 0.31
CLCN3P51790 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17■□□□□ 0.31
CLCN3P51790 AC092658.1-201ENST00000505836 891 ntBASIC17■□□□□ 0.31
CLCN3P51790 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CLCN3P51790 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17■□□□□ 0.31
CLCN3P51790 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CLCN3P51790 AL583810.1-201ENST00000553344 1045 ntBASIC17■□□□□ 0.31
CLCN3P51790 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17■□□□□ 0.31
CLCN3P51790 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17■□□□□ 0.31
CLCN3P51790 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17■□□□□ 0.31
CLCN3P51790 AC007787.1-201ENST00000588095 1583 ntBASIC17■□□□□ 0.31
CLCN3P51790 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLCN3P51790 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLCN3P51790 AL138709.1-201ENST00000614840 1693 ntBASIC17■□□□□ 0.31
CLCN3P51790 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17■□□□□ 0.31
CLCN3P51790 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17■□□□□ 0.31
CLCN3P51790 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17■□□□□ 0.31
CLCN3P51790 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLCN3P51790 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLCN3P51790 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17■□□□□ 0.31
CLCN3P51790 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLCN3P51790 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.99■□□□□ 0.31
CLCN3P51790 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.99■□□□□ 0.31
CLCN3P51790 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.99■□□□□ 0.31
CLCN3P51790 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.99■□□□□ 0.31
CLCN3P51790 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CLCN3P51790 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLCN3P51790 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLCN3P51790 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.99■□□□□ 0.31
CLCN3P51790 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.99■□□□□ 0.31
CLCN3P51790 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.99■□□□□ 0.31
CLCN3P51790 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLCN3P51790 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.99■□□□□ 0.31
CLCN3P51790 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLCN3P51790 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLCN3P51790 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLCN3P51790 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.99■□□□□ 0.31
CLCN3P51790 AL590640.2-201ENST00000457038 527 ntBASIC16.99■□□□□ 0.31
CLCN3P51790 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.99■□□□□ 0.31
CLCN3P51790 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.99■□□□□ 0.31
CLCN3P51790 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.99■□□□□ 0.31
CLCN3P51790 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC16.99■□□□□ 0.31
CLCN3P51790 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.99■□□□□ 0.31
CLCN3P51790 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.99■□□□□ 0.31
CLCN3P51790 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.99■□□□□ 0.31
CLCN3P51790 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.99■□□□□ 0.31
CLCN3P51790 RHOXF1P1-202ENST00000635473 501 ntBASIC16.99■□□□□ 0.31
CLCN3P51790 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CLCN3P51790 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLCN3P51790 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.99■□□□□ 0.31
CLCN3P51790 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLCN3P51790 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CLCN3P51790 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLCN3P51790 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLCN3P51790 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CLCN3P51790 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLCN3P51790 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLCN3P51790 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CLCN3P51790 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms