Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.91□□□□□ -0.18
SRP9P49458 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.91□□□□□ -0.18
SRP9P49458 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SRP9P49458 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SRP9P49458 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SRP9P49458 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.91□□□□□ -0.18
SRP9P49458 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.91□□□□□ -0.18
SRP9P49458 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SRP9P49458 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SRP9P49458 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SRP9P49458 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.91□□□□□ -0.18
SRP9P49458 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SRP9P49458 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.91□□□□□ -0.18
SRP9P49458 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SRP9P49458 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SRP9P49458 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SRP9P49458 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SRP9P49458 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SRP9P49458 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.91□□□□□ -0.18
SRP9P49458 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
SRP9P49458 DNAJB3-202ENST00000449667 1266 ntBASIC13.91□□□□□ -0.18
SRP9P49458 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.91□□□□□ -0.18
SRP9P49458 AC098859.1-201ENST00000502915 1238 ntBASIC13.91□□□□□ -0.18
SRP9P49458 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.91□□□□□ -0.18
SRP9P49458 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.91□□□□□ -0.18
SRP9P49458 AL138918.1-201ENST00000568306 659 ntBASIC13.91□□□□□ -0.18
SRP9P49458 AP000842.3-202ENST00000569238 1080 ntBASIC13.91□□□□□ -0.18
SRP9P49458 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.91□□□□□ -0.18
SRP9P49458 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.91□□□□□ -0.18
SRP9P49458 AC006538.3-201ENST00000612495 578 ntBASIC13.91□□□□□ -0.18
SRP9P49458 SPTSSB-204ENST00000617024 1292 ntBASIC13.91□□□□□ -0.18
SRP9P49458 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
SRP9P49458 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SRP9P49458 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SRP9P49458 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.91□□□□□ -0.18
SRP9P49458 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SRP9P49458 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
SRP9P49458 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SRP9P49458 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SRP9P49458 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SRP9P49458 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SRP9P49458 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SRP9P49458 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SRP9P49458 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
SRP9P49458 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.9□□□□□ -0.18
SRP9P49458 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.9□□□□□ -0.18
SRP9P49458 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SRP9P49458 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SRP9P49458 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SRP9P49458 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SRP9P49458 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SRP9P49458 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SRP9P49458 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SRP9P49458 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.9□□□□□ -0.18
SRP9P49458 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.9□□□□□ -0.18
SRP9P49458 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.9□□□□□ -0.18
SRP9P49458 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SRP9P49458 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.9□□□□□ -0.18
SRP9P49458 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
SRP9P49458 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SRP9P49458 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.9□□□□□ -0.18
SRP9P49458 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SRP9P49458 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SRP9P49458 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.9□□□□□ -0.18
SRP9P49458 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SRP9P49458 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.9□□□□□ -0.18
SRP9P49458 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SRP9P49458 AL627223.1-201ENST00000416693 442 ntBASIC13.9□□□□□ -0.18
SRP9P49458 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.9□□□□□ -0.18
SRP9P49458 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.9□□□□□ -0.18
SRP9P49458 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.9□□□□□ -0.18
SRP9P49458 AC069335.1-201ENST00000489972 472 ntBASIC13.9□□□□□ -0.18
SRP9P49458 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SRP9P49458 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SRP9P49458 LINC01225-203ENST00000563550 1244 ntBASIC13.9□□□□□ -0.18
SRP9P49458 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.9□□□□□ -0.18
SRP9P49458 AC024267.1-201ENST00000582320 895 ntBASIC13.9□□□□□ -0.18
SRP9P49458 AL365330.1-201ENST00000607459 531 ntBASIC13.9□□□□□ -0.18
SRP9P49458 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SRP9P49458 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SRP9P49458 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.9□□□□□ -0.18
SRP9P49458 FGD5P1-202ENST00000614866 2498 ntBASIC13.9□□□□□ -0.18
SRP9P49458 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SRP9P49458 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SRP9P49458 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SRP9P49458 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.9□□□□□ -0.18
SRP9P49458 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SRP9P49458 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.9□□□□□ -0.18
SRP9P49458 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
SRP9P49458 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
SRP9P49458 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
SRP9P49458 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
SRP9P49458 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SRP9P49458 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SRP9P49458 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.89□□□□□ -0.19
SRP9P49458 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SRP9P49458 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SRP9P49458 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.89□□□□□ -0.19
SRP9P49458 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.89□□□□□ -0.19
SRP9P49458 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms