Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HADHAP40939 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.81■□□□□ 0.12
HADHAP40939 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HADHAP40939 AL607033.1-201ENST00000623900 1599 ntBASIC15.81■□□□□ 0.12
HADHAP40939 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.81■□□□□ 0.12
HADHAP40939 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
HADHAP40939 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.81■□□□□ 0.12
HADHAP40939 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.81■□□□□ 0.12
HADHAP40939 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
HADHAP40939 PCDHA3-202ENST00000532566 4594 ntBASIC15.81■□□□□ 0.12
HADHAP40939 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HADHAP40939 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
HADHAP40939 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HADHAP40939 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
HADHAP40939 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.81■□□□□ 0.12
HADHAP40939 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HADHAP40939 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
HADHAP40939 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
HADHAP40939 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.8■□□□□ 0.12
HADHAP40939 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.8■□□□□ 0.12
HADHAP40939 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.8■□□□□ 0.12
HADHAP40939 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.8■□□□□ 0.12
HADHAP40939 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HADHAP40939 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HADHAP40939 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HADHAP40939 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HADHAP40939 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HADHAP40939 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HADHAP40939 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.8■□□□□ 0.12
HADHAP40939 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HADHAP40939 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
HADHAP40939 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HADHAP40939 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HADHAP40939 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HADHAP40939 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HADHAP40939 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HADHAP40939 TREML5P-201ENST00000421694 576 ntBASIC15.8■□□□□ 0.12
HADHAP40939 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.8■□□□□ 0.12
HADHAP40939 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.8■□□□□ 0.12
HADHAP40939 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HADHAP40939 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.8■□□□□ 0.12
HADHAP40939 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.8■□□□□ 0.12
HADHAP40939 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HADHAP40939 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.8■□□□□ 0.12
HADHAP40939 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.8■□□□□ 0.12
HADHAP40939 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.8■□□□□ 0.12
HADHAP40939 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HADHAP40939 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HADHAP40939 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HADHAP40939 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HADHAP40939 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HADHAP40939 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HADHAP40939 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HADHAP40939 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.8■□□□□ 0.12
HADHAP40939 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.8■□□□□ 0.12
HADHAP40939 LINC01101-201ENST00000622953 1884 ntBASIC15.8■□□□□ 0.12
HADHAP40939 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HADHAP40939 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HADHAP40939 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HADHAP40939 Z97205.2-201ENST00000564697 1639 ntBASIC15.79■□□□□ 0.12
HADHAP40939 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HADHAP40939 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HADHAP40939 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HADHAP40939 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
HADHAP40939 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HADHAP40939 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HADHAP40939 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HADHAP40939 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
HADHAP40939 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HADHAP40939 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.79■□□□□ 0.12
HADHAP40939 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.79■□□□□ 0.12
HADHAP40939 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HADHAP40939 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.79■□□□□ 0.12
HADHAP40939 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HADHAP40939 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HADHAP40939 AC092580.3-201ENST00000430932 139 ntBASIC15.79■□□□□ 0.12
HADHAP40939 TARDBPP1-201ENST00000442013 1203 ntBASIC15.79■□□□□ 0.12
HADHAP40939 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.79■□□□□ 0.12
HADHAP40939 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.79■□□□□ 0.12
HADHAP40939 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.79■□□□□ 0.12
HADHAP40939 IGHV3-42-201ENST00000520410 361 ntBASIC15.79■□□□□ 0.12
HADHAP40939 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.79■□□□□ 0.12
HADHAP40939 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.79■□□□□ 0.12
HADHAP40939 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.79■□□□□ 0.12
HADHAP40939 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HADHAP40939 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HADHAP40939 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.79■□□□□ 0.12
HADHAP40939 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.79■□□□□ 0.12
HADHAP40939 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HADHAP40939 TCAF2P1-201ENST00000291129 2421 ntBASIC15.79■□□□□ 0.12
HADHAP40939 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
HADHAP40939 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HADHAP40939 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HADHAP40939 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HADHAP40939 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HADHAP40939 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.79■□□□□ 0.12
HADHAP40939 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HADHAP40939 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.79■□□□□ 0.12
HADHAP40939 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.79■□□□□ 0.12
HADHAP40939 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms