Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFC5P40937 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFC5P40937 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.14■□□□□ 0.33
RFC5P40937 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFC5P40937 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFC5P40937 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFC5P40937 AC079776.1-201ENST00000401540 1152 ntBASIC17.14■□□□□ 0.33
RFC5P40937 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.14■□□□□ 0.33
RFC5P40937 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RFC5P40937 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.14■□□□□ 0.33
RFC5P40937 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.14■□□□□ 0.33
RFC5P40937 AC093433.1-201ENST00000458048 571 ntBASIC17.14■□□□□ 0.33
RFC5P40937 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
RFC5P40937 AP001582.1-201ENST00000525856 295 ntBASIC17.14■□□□□ 0.33
RFC5P40937 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.14■□□□□ 0.33
RFC5P40937 SLC25A47P1-201ENST00000531577 414 ntBASIC17.14■□□□□ 0.33
RFC5P40937 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.14■□□□□ 0.33
RFC5P40937 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.14■□□□□ 0.33
RFC5P40937 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.14■□□□□ 0.33
RFC5P40937 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
RFC5P40937 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.14■□□□□ 0.33
RFC5P40937 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFC5P40937 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
RFC5P40937 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFC5P40937 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFC5P40937 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFC5P40937 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.14■□□□□ 0.33
RFC5P40937 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFC5P40937 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFC5P40937 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFC5P40937 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RFC5P40937 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFC5P40937 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
RFC5P40937 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFC5P40937 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RFC5P40937 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFC5P40937 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.13■□□□□ 0.33
RFC5P40937 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFC5P40937 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RFC5P40937 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFC5P40937 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFC5P40937 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RFC5P40937 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFC5P40937 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFC5P40937 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.13■□□□□ 0.33
RFC5P40937 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFC5P40937 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
RFC5P40937 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFC5P40937 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.13■□□□□ 0.33
RFC5P40937 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.13■□□□□ 0.33
RFC5P40937 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
RFC5P40937 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.13■□□□□ 0.33
RFC5P40937 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.13■□□□□ 0.33
RFC5P40937 SSR1P1-201ENST00000407630 814 ntBASIC17.13■□□□□ 0.33
RFC5P40937 BAATP1-201ENST00000412284 1225 ntBASIC17.13■□□□□ 0.33
RFC5P40937 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.13■□□□□ 0.33
RFC5P40937 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.13■□□□□ 0.33
RFC5P40937 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.13■□□□□ 0.33
RFC5P40937 AC012441.1-201ENST00000446669 685 ntBASIC17.13■□□□□ 0.33
RFC5P40937 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.13■□□□□ 0.33
RFC5P40937 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RFC5P40937 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.13■□□□□ 0.33
RFC5P40937 KRT17P8-201ENST00000540749 863 ntBASIC17.13■□□□□ 0.33
RFC5P40937 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.13■□□□□ 0.33
RFC5P40937 RAB43P1-201ENST00000561790 589 ntBASIC17.13■□□□□ 0.33
RFC5P40937 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.13■□□□□ 0.33
RFC5P40937 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.13■□□□□ 0.33
RFC5P40937 BX539320.1-201ENST00000623759 877 ntBASIC17.13■□□□□ 0.33
RFC5P40937 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.13■□□□□ 0.33
RFC5P40937 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.13■□□□□ 0.33
RFC5P40937 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFC5P40937 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFC5P40937 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFC5P40937 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFC5P40937 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFC5P40937 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFC5P40937 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.13■□□□□ 0.33
RFC5P40937 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.13■□□□□ 0.33
RFC5P40937 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.13■□□□□ 0.33
RFC5P40937 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
RFC5P40937 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFC5P40937 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.13■□□□□ 0.33
RFC5P40937 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.12■□□□□ 0.33
RFC5P40937 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFC5P40937 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFC5P40937 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFC5P40937 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFC5P40937 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFC5P40937 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFC5P40937 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFC5P40937 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFC5P40937 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RFC5P40937 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFC5P40937 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFC5P40937 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RFC5P40937 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFC5P40937 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFC5P40937 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFC5P40937 AC005229.1-201ENST00000392885 409 ntBASIC17.12■□□□□ 0.33
RFC5P40937 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms