Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.87□□□□□ -0.19
HOXC12P31275 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.87□□□□□ -0.19
HOXC12P31275 SLED1-202ENST00000512051 380 ntBASIC13.87□□□□□ -0.19
HOXC12P31275 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.87□□□□□ -0.19
HOXC12P31275 TPRX2P-201ENST00000535362 881 ntBASIC13.87□□□□□ -0.19
HOXC12P31275 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
HOXC12P31275 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.87□□□□□ -0.19
HOXC12P31275 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.87□□□□□ -0.19
HOXC12P31275 WASH4P-201ENST00000564273 1246 ntBASIC13.87□□□□□ -0.19
HOXC12P31275 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.87□□□□□ -0.19
HOXC12P31275 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.87□□□□□ -0.19
HOXC12P31275 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.87□□□□□ -0.19
HOXC12P31275 AL512343.1-201ENST00000605837 169 ntBASIC13.87□□□□□ -0.19
HOXC12P31275 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.87□□□□□ -0.19
HOXC12P31275 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.87□□□□□ -0.19
HOXC12P31275 AC004461.2-201ENST00000629517 803 ntBASIC13.87□□□□□ -0.19
HOXC12P31275 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC13.87□□□□□ -0.19
HOXC12P31275 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
HOXC12P31275 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.87□□□□□ -0.19
HOXC12P31275 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC12P31275 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC12P31275 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC13.87□□□□□ -0.19
HOXC12P31275 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC12P31275 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
HOXC12P31275 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC12P31275 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC12P31275 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC12P31275 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.87□□□□□ -0.19
HOXC12P31275 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC12P31275 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.87□□□□□ -0.19
HOXC12P31275 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
HOXC12P31275 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC12P31275 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC12P31275 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC12P31275 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC12P31275 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
HOXC12P31275 Z97205.2-201ENST00000564697 1639 ntBASIC13.86□□□□□ -0.19
HOXC12P31275 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
HOXC12P31275 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HOXC12P31275 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
HOXC12P31275 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC13.86□□□□□ -0.19
HOXC12P31275 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HOXC12P31275 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
HOXC12P31275 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
HOXC12P31275 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HOXC12P31275 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.86□□□□□ -0.19
HOXC12P31275 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC13.86□□□□□ -0.19
HOXC12P31275 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HOXC12P31275 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
HOXC12P31275 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
HOXC12P31275 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.86□□□□□ -0.19
HOXC12P31275 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HOXC12P31275 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HOXC12P31275 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.86□□□□□ -0.19
HOXC12P31275 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.86□□□□□ -0.19
HOXC12P31275 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.86□□□□□ -0.19
HOXC12P31275 RN7SL837P-201ENST00000463010 287 ntBASIC13.86□□□□□ -0.19
HOXC12P31275 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.86□□□□□ -0.19
HOXC12P31275 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
HOXC12P31275 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC13.86□□□□□ -0.19
HOXC12P31275 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.86□□□□□ -0.19
HOXC12P31275 AC055876.2-201ENST00000531834 546 ntBASIC13.86□□□□□ -0.19
HOXC12P31275 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.86□□□□□ -0.19
HOXC12P31275 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.86□□□□□ -0.19
HOXC12P31275 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
HOXC12P31275 AC099568.2-201ENST00000609194 695 ntBASIC13.86□□□□□ -0.19
HOXC12P31275 SNX12-206ENST00000622259 661 ntTSL 5 BASIC13.86□□□□□ -0.19
HOXC12P31275 AC007431.3-201ENST00000623221 587 ntBASIC13.86□□□□□ -0.19
HOXC12P31275 AL033527.4-201ENST00000641026 673 ntBASIC13.86□□□□□ -0.19
HOXC12P31275 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
HOXC12P31275 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HOXC12P31275 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.86□□□□□ -0.19
HOXC12P31275 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.86□□□□□ -0.19
HOXC12P31275 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.86□□□□□ -0.19
HOXC12P31275 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
HOXC12P31275 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HOXC12P31275 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HOXC12P31275 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.86□□□□□ -0.19
HOXC12P31275 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HOXC12P31275 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
HOXC12P31275 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HOXC12P31275 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.86□□□□□ -0.19
HOXC12P31275 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.86□□□□□ -0.19
HOXC12P31275 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HOXC12P31275 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HOXC12P31275 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HOXC12P31275 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HOXC12P31275 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HOXC12P31275 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HOXC12P31275 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HOXC12P31275 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.85□□□□□ -0.19
HOXC12P31275 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HOXC12P31275 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
HOXC12P31275 SLC7A15P-201ENST00000424028 1363 ntBASIC13.85□□□□□ -0.19
HOXC12P31275 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HOXC12P31275 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
HOXC12P31275 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.85□□□□□ -0.19
HOXC12P31275 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HOXC12P31275 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.85□□□□□ -0.19
HOXC12P31275 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms