Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
HOXC8P31273 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HOXC8P31273 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HOXC8P31273 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
HOXC8P31273 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
HOXC8P31273 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
HOXC8P31273 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.7■□□□□ 0.26
HOXC8P31273 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HOXC8P31273 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HOXC8P31273 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HOXC8P31273 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HOXC8P31273 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HOXC8P31273 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HOXC8P31273 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
HOXC8P31273 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HOXC8P31273 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HOXC8P31273 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HOXC8P31273 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
HOXC8P31273 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HOXC8P31273 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HOXC8P31273 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HOXC8P31273 DPM3-202ENST00000368399 517 ntBASIC16.69■□□□□ 0.26
HOXC8P31273 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HOXC8P31273 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.69■□□□□ 0.26
HOXC8P31273 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.69■□□□□ 0.26
HOXC8P31273 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.69■□□□□ 0.26
HOXC8P31273 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC16.69■□□□□ 0.26
HOXC8P31273 DEF8-202ENST00000418391 852 ntTSL 2 BASIC16.69■□□□□ 0.26
HOXC8P31273 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC16.69■□□□□ 0.26
HOXC8P31273 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC16.69■□□□□ 0.26
HOXC8P31273 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.69■□□□□ 0.26
HOXC8P31273 AC022217.1-201ENST00000521069 738 ntBASIC16.69■□□□□ 0.26
HOXC8P31273 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.69■□□□□ 0.26
HOXC8P31273 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HOXC8P31273 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC16.69■□□□□ 0.26
HOXC8P31273 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.69■□□□□ 0.26
HOXC8P31273 BNIP3P13-201ENST00000599968 566 ntBASIC16.69■□□□□ 0.26
HOXC8P31273 AL023803.2-201ENST00000620080 638 ntBASIC16.69■□□□□ 0.26
HOXC8P31273 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC16.69■□□□□ 0.26
HOXC8P31273 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
HOXC8P31273 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HOXC8P31273 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HOXC8P31273 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HOXC8P31273 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HOXC8P31273 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
HOXC8P31273 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HOXC8P31273 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HOXC8P31273 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HOXC8P31273 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HOXC8P31273 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HOXC8P31273 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
HOXC8P31273 HTR7P1-202ENST00000624664 4411 ntBASIC16.69■□□□□ 0.26
HOXC8P31273 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
HOXC8P31273 FKBP4P6-201ENST00000457486 1332 ntBASIC16.69■□□□□ 0.26
HOXC8P31273 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.69■□□□□ 0.26
HOXC8P31273 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HOXC8P31273 KRT8P29-201ENST00000420409 1371 ntBASIC16.68■□□□□ 0.26
HOXC8P31273 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HOXC8P31273 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HOXC8P31273 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
HOXC8P31273 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.68■□□□□ 0.26
HOXC8P31273 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.68■□□□□ 0.26
HOXC8P31273 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HOXC8P31273 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
HOXC8P31273 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.68■□□□□ 0.26
HOXC8P31273 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HOXC8P31273 MIR4683-201ENST00000579659 81 ntBASIC16.68■□□□□ 0.26
HOXC8P31273 AC009955.4-201ENST00000597192 544 ntBASIC16.68■□□□□ 0.26
HOXC8P31273 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HOXC8P31273 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HOXC8P31273 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HOXC8P31273 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HOXC8P31273 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC16.68■□□□□ 0.26
HOXC8P31273 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.68■□□□□ 0.26
HOXC8P31273 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.68■□□□□ 0.26
HOXC8P31273 AL391005.1-201ENST00000623953 2435 ntBASIC16.68■□□□□ 0.26
HOXC8P31273 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HOXC8P31273 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.68■□□□□ 0.26
HOXC8P31273 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HOXC8P31273 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.68■□□□□ 0.26
HOXC8P31273 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HOXC8P31273 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HOXC8P31273 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.68■□□□□ 0.26
HOXC8P31273 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
HOXC8P31273 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.68■□□□□ 0.26
HOXC8P31273 TUBBP5-203ENST00000508529 1334 ntBASIC16.68■□□□□ 0.26
HOXC8P31273 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HOXC8P31273 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HOXC8P31273 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HOXC8P31273 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.67■□□□□ 0.26
HOXC8P31273 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
HOXC8P31273 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HOXC8P31273 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HOXC8P31273 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HOXC8P31273 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HOXC8P31273 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC16.67■□□□□ 0.26
HOXC8P31273 CICP11-201ENST00000434745 2827 ntBASIC16.67■□□□□ 0.26
HOXC8P31273 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HOXC8P31273 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HOXC8P31273 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms