Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC18.67■□□□□ 0.58
LMNB1P20700 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
LMNB1P20700 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC18.67■□□□□ 0.58
LMNB1P20700 AL136295.7-201ENST00000619226 1200 ntBASIC18.67■□□□□ 0.58
LMNB1P20700 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
LMNB1P20700 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC18.67■□□□□ 0.58
LMNB1P20700 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC18.67■□□□□ 0.58
LMNB1P20700 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
LMNB1P20700 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
LMNB1P20700 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
LMNB1P20700 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
LMNB1P20700 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
LMNB1P20700 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LMNB1P20700 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.67■□□□□ 0.58
LMNB1P20700 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC18.67■□□□□ 0.58
LMNB1P20700 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.66■□□□□ 0.58
LMNB1P20700 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LMNB1P20700 CYP51A1P3-201ENST00000400072 1428 ntBASIC18.66■□□□□ 0.58
LMNB1P20700 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LMNB1P20700 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LMNB1P20700 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LMNB1P20700 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LMNB1P20700 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LMNB1P20700 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LMNB1P20700 AC005915.1-201ENST00000624912 2018 ntBASIC18.66■□□□□ 0.58
LMNB1P20700 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LMNB1P20700 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC18.66■□□□□ 0.58
LMNB1P20700 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
LMNB1P20700 AC078991.1-201ENST00000437297 610 ntBASIC18.66■□□□□ 0.58
LMNB1P20700 PUDPP3-201ENST00000445368 636 ntBASIC18.66■□□□□ 0.58
LMNB1P20700 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.66■□□□□ 0.58
LMNB1P20700 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC18.66■□□□□ 0.58
LMNB1P20700 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC18.66■□□□□ 0.58
LMNB1P20700 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LMNB1P20700 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LMNB1P20700 CDK7-214ENST00000626796 358 ntTSL 5 BASIC18.66■□□□□ 0.58
LMNB1P20700 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC18.66■□□□□ 0.58
LMNB1P20700 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LMNB1P20700 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LMNB1P20700 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LMNB1P20700 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LMNB1P20700 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LMNB1P20700 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LMNB1P20700 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LMNB1P20700 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC18.66■□□□□ 0.58
LMNB1P20700 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.66■□□□□ 0.58
LMNB1P20700 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
LMNB1P20700 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LMNB1P20700 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LMNB1P20700 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.66■□□□□ 0.58
LMNB1P20700 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LMNB1P20700 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
LMNB1P20700 UBALD1-205ENST00000590891 2641 ntBASIC18.66■□□□□ 0.58
LMNB1P20700 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LMNB1P20700 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LMNB1P20700 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.66■□□□□ 0.58
LMNB1P20700 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LMNB1P20700 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LMNB1P20700 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
LMNB1P20700 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
LMNB1P20700 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.65■□□□□ 0.58
LMNB1P20700 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LMNB1P20700 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.65■□□□□ 0.58
LMNB1P20700 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LMNB1P20700 AC084018.2-201ENST00000613093 2607 ntBASIC18.65■□□□□ 0.58
LMNB1P20700 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
LMNB1P20700 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LMNB1P20700 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
LMNB1P20700 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC18.65■□□□□ 0.58
LMNB1P20700 LSM5-207ENST00000410044 687 ntTSL 3 BASIC18.65■□□□□ 0.58
LMNB1P20700 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC18.65■□□□□ 0.58
LMNB1P20700 EIF3FP3-201ENST00000434851 1086 ntBASIC18.65■□□□□ 0.58
LMNB1P20700 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC18.65■□□□□ 0.58
LMNB1P20700 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC18.65■□□□□ 0.58
LMNB1P20700 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LMNB1P20700 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LMNB1P20700 AC005324.6-201ENST00000587972 613 ntBASIC18.65■□□□□ 0.58
LMNB1P20700 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.65■□□□□ 0.58
LMNB1P20700 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.65■□□□□ 0.58
LMNB1P20700 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LMNB1P20700 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LMNB1P20700 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LMNB1P20700 AC105020.1-201ENST00000435356 2205 ntBASIC18.65■□□□□ 0.58
LMNB1P20700 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LMNB1P20700 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.65■□□□□ 0.58
LMNB1P20700 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LMNB1P20700 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.64■□□□□ 0.58
LMNB1P20700 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
LMNB1P20700 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LMNB1P20700 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LMNB1P20700 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LMNB1P20700 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LMNB1P20700 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LMNB1P20700 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LMNB1P20700 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LMNB1P20700 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LMNB1P20700 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LMNB1P20700 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LMNB1P20700 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LMNB1P20700 PFN2-202ENST00000423691 911 ntTSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms