Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AL049840.4-201ENST00000602422 811 ntBASIC18.29■□□□□ 0.52
TOP1P11387 IGHV3-72-202ENST00000621503 303 ntBASIC18.29■□□□□ 0.52
TOP1P11387 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TOP1P11387 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TOP1P11387 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TOP1P11387 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.29■□□□□ 0.52
TOP1P11387 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TOP1P11387 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TOP1P11387 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TOP1P11387 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TOP1P11387 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TOP1P11387 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC18.28■□□□□ 0.52
TOP1P11387 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
TOP1P11387 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.28■□□□□ 0.52
TOP1P11387 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TOP1P11387 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TOP1P11387 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TOP1P11387 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
TOP1P11387 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TOP1P11387 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TOP1P11387 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.28■□□□□ 0.52
TOP1P11387 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TOP1P11387 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TOP1P11387 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
TOP1P11387 AL512384.1-201ENST00000406683 331 ntBASIC18.28■□□□□ 0.52
TOP1P11387 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC18.28■□□□□ 0.52
TOP1P11387 RN7SL837P-201ENST00000463010 287 ntBASIC18.28■□□□□ 0.52
TOP1P11387 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.28■□□□□ 0.52
TOP1P11387 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.28■□□□□ 0.52
TOP1P11387 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.28■□□□□ 0.52
TOP1P11387 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.28■□□□□ 0.52
TOP1P11387 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC18.28■□□□□ 0.52
TOP1P11387 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TOP1P11387 AL033527.5-201ENST00000641382 801 ntBASIC18.28■□□□□ 0.52
TOP1P11387 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TOP1P11387 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TOP1P11387 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.28■□□□□ 0.52
TOP1P11387 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TOP1P11387 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TOP1P11387 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
TOP1P11387 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TOP1P11387 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TOP1P11387 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TOP1P11387 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TOP1P11387 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TOP1P11387 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TOP1P11387 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TOP1P11387 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TOP1P11387 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.27■□□□□ 0.52
TOP1P11387 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TOP1P11387 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TOP1P11387 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
TOP1P11387 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
TOP1P11387 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TOP1P11387 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TOP1P11387 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TOP1P11387 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
TOP1P11387 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TOP1P11387 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.27■□□□□ 0.52
TOP1P11387 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.27■□□□□ 0.52
TOP1P11387 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
TOP1P11387 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TOP1P11387 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TOP1P11387 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TOP1P11387 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TOP1P11387 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TOP1P11387 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.27■□□□□ 0.52
TOP1P11387 AC134915.1-201ENST00000426461 574 ntBASIC18.27■□□□□ 0.52
TOP1P11387 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
TOP1P11387 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC18.27■□□□□ 0.52
TOP1P11387 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.27■□□□□ 0.52
TOP1P11387 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.27■□□□□ 0.52
TOP1P11387 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.27■□□□□ 0.52
TOP1P11387 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.27■□□□□ 0.52
TOP1P11387 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TOP1P11387 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.27■□□□□ 0.52
TOP1P11387 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TOP1P11387 AC132938.2-201ENST00000579188 680 ntBASIC18.27■□□□□ 0.52
TOP1P11387 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.27■□□□□ 0.52
TOP1P11387 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.27■□□□□ 0.52
TOP1P11387 AC133539.2-201ENST00000604757 467 ntBASIC18.27■□□□□ 0.52
TOP1P11387 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
TOP1P11387 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC18.27■□□□□ 0.52
TOP1P11387 NID2-208ENST00000617139 3827 ntTSL 5 BASIC18.27■□□□□ 0.52
TOP1P11387 AL591163.1-201ENST00000641757 987 ntBASIC18.27■□□□□ 0.52
TOP1P11387 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.27■□□□□ 0.52
TOP1P11387 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
TOP1P11387 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TOP1P11387 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
TOP1P11387 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
TOP1P11387 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TOP1P11387 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TOP1P11387 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
TOP1P11387 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TOP1P11387 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC18.27■□□□□ 0.51
TOP1P11387 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TOP1P11387 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TOP1P11387 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
TOP1P11387 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TOP1P11387 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms