Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC12.21□□□□□ -0.45
CD28P10747 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC12.21□□□□□ -0.45
CD28P10747 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.21□□□□□ -0.45
CD28P10747 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.21□□□□□ -0.45
CD28P10747 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CD28P10747 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC12.21□□□□□ -0.45
CD28P10747 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CD28P10747 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CD28P10747 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CD28P10747 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CD28P10747 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.21□□□□□ -0.46
CD28P10747 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CD28P10747 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CD28P10747 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CD28P10747 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
CD28P10747 AL121723.1-201ENST00000445194 1519 ntBASIC12.21□□□□□ -0.46
CD28P10747 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CD28P10747 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CD28P10747 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CD28P10747 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
CD28P10747 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC12.21□□□□□ -0.46
CD28P10747 LRRFIP1P1-201ENST00000498774 2246 ntBASIC12.21□□□□□ -0.46
CD28P10747 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CD28P10747 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD28P10747 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD28P10747 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD28P10747 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC12.2□□□□□ -0.46
CD28P10747 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC12.2□□□□□ -0.46
CD28P10747 SBF1P1-201ENST00000444527 5631 ntBASIC12.2□□□□□ -0.46
CD28P10747 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC12.2□□□□□ -0.46
CD28P10747 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC12.2□□□□□ -0.46
CD28P10747 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC12.2□□□□□ -0.46
CD28P10747 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC12.2□□□□□ -0.46
CD28P10747 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CD28P10747 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CD28P10747 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD28P10747 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD28P10747 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC12.2□□□□□ -0.46
CD28P10747 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC12.2□□□□□ -0.46
CD28P10747 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CD28P10747 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CD28P10747 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC12.2□□□□□ -0.46
CD28P10747 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD28P10747 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
CD28P10747 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC12.2□□□□□ -0.46
CD28P10747 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD28P10747 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC12.2□□□□□ -0.46
CD28P10747 MIR648-201ENST00000385046 94 ntBASIC12.2□□□□□ -0.46
CD28P10747 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC12.2□□□□□ -0.46
CD28P10747 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.2□□□□□ -0.46
CD28P10747 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CD28P10747 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
CD28P10747 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC12.2□□□□□ -0.46
CD28P10747 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.2□□□□□ -0.46
CD28P10747 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC12.2□□□□□ -0.46
CD28P10747 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CD28P10747 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD28P10747 MFF-223ENST00000524634 647 ntTSL 2 BASIC12.2□□□□□ -0.46
CD28P10747 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC12.2□□□□□ -0.46
CD28P10747 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC12.2□□□□□ -0.46
CD28P10747 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC12.2□□□□□ -0.46
CD28P10747 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC12.2□□□□□ -0.46
CD28P10747 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.2□□□□□ -0.46
CD28P10747 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
CD28P10747 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC12.2□□□□□ -0.46
CD28P10747 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC12.2□□□□□ -0.46
CD28P10747 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.2□□□□□ -0.46
CD28P10747 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CD28P10747 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD28P10747 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CD28P10747 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD28P10747 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CD28P10747 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CD28P10747 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC12.2□□□□□ -0.46
CD28P10747 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
CD28P10747 AL162727.3-201ENST00000635661 2787 ntBASIC12.2□□□□□ -0.46
CD28P10747 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD28P10747 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC12.2□□□□□ -0.46
CD28P10747 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CD28P10747 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
CD28P10747 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD28P10747 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC12.2□□□□□ -0.46
CD28P10747 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD28P10747 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC12.2□□□□□ -0.46
CD28P10747 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD28P10747 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC12.2□□□□□ -0.46
CD28P10747 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CD28P10747 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
CD28P10747 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC12.2□□□□□ -0.46
CD28P10747 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD28P10747 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD28P10747 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC12.2□□□□□ -0.46
CD28P10747 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD28P10747 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD28P10747 AL662844.4-201ENST00000606367 2838 ntBASIC12.19□□□□□ -0.46
CD28P10747 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD28P10747 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC12.19□□□□□ -0.46
CD28P10747 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD28P10747 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CD28P10747 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms