Protein–RNA interactions for Protein: P0DMS9

TMIGD3, Transmembrane domain-containing protein TMIGD3, humanhuman

Predicted RBP Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMIGD3P0DMS9 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.16□□□□□ -0.14
TMIGD3P0DMS9 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMIGD3P0DMS9 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TMIGD3P0DMS9 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TMIGD3P0DMS9 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMIGD3P0DMS9 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMIGD3P0DMS9 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMIGD3P0DMS9 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
TMIGD3P0DMS9 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.16□□□□□ -0.14
TMIGD3P0DMS9 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TMIGD3P0DMS9 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TMIGD3P0DMS9 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.16□□□□□ -0.14
TMIGD3P0DMS9 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMIGD3P0DMS9 AZGP1P1-201ENST00000411909 902 ntBASIC14.16□□□□□ -0.14
TMIGD3P0DMS9 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TMIGD3P0DMS9 RN7SL752P-201ENST00000463779 287 ntBASIC14.16□□□□□ -0.14
TMIGD3P0DMS9 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.16□□□□□ -0.14
TMIGD3P0DMS9 MEIS3P1-201ENST00000495167 958 ntBASIC14.16□□□□□ -0.14
TMIGD3P0DMS9 AC011495.1-201ENST00000498085 584 ntBASIC14.16□□□□□ -0.14
TMIGD3P0DMS9 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.16□□□□□ -0.14
TMIGD3P0DMS9 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TMIGD3P0DMS9 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.16□□□□□ -0.14
TMIGD3P0DMS9 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TMIGD3P0DMS9 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TMIGD3P0DMS9 AC099568.2-201ENST00000609194 695 ntBASIC14.16□□□□□ -0.14
TMIGD3P0DMS9 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMIGD3P0DMS9 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TMIGD3P0DMS9 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.16□□□□□ -0.14
TMIGD3P0DMS9 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMIGD3P0DMS9 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TMIGD3P0DMS9 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TMIGD3P0DMS9 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.16□□□□□ -0.14
TMIGD3P0DMS9 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMIGD3P0DMS9 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMIGD3P0DMS9 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.16□□□□□ -0.14
TMIGD3P0DMS9 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.16□□□□□ -0.14
TMIGD3P0DMS9 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
TMIGD3P0DMS9 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.16□□□□□ -0.14
TMIGD3P0DMS9 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMIGD3P0DMS9 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TMIGD3P0DMS9 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TMIGD3P0DMS9 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TMIGD3P0DMS9 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TMIGD3P0DMS9 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.15□□□□□ -0.14
TMIGD3P0DMS9 FLJ16779-201ENST00000612722 7638 ntBASIC14.15□□□□□ -0.14
TMIGD3P0DMS9 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TMIGD3P0DMS9 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TMIGD3P0DMS9 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
TMIGD3P0DMS9 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TMIGD3P0DMS9 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TMIGD3P0DMS9 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TMIGD3P0DMS9 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TMIGD3P0DMS9 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.15□□□□□ -0.14
TMIGD3P0DMS9 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.15□□□□□ -0.14
TMIGD3P0DMS9 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TMIGD3P0DMS9 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.15□□□□□ -0.14
TMIGD3P0DMS9 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TMIGD3P0DMS9 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TMIGD3P0DMS9 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TMIGD3P0DMS9 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TMIGD3P0DMS9 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.15□□□□□ -0.14
TMIGD3P0DMS9 HAUS4P1-201ENST00000406739 1145 ntBASIC14.15□□□□□ -0.14
TMIGD3P0DMS9 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.15□□□□□ -0.14
TMIGD3P0DMS9 EEF1DP4-201ENST00000446006 880 ntBASIC14.15□□□□□ -0.14
TMIGD3P0DMS9 MYCLP2-201ENST00000449268 967 ntBASIC14.15□□□□□ -0.14
TMIGD3P0DMS9 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TMIGD3P0DMS9 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.15□□□□□ -0.14
TMIGD3P0DMS9 AC123567.1-201ENST00000548294 1261 ntBASIC14.15□□□□□ -0.14
TMIGD3P0DMS9 WASH4P-201ENST00000564273 1246 ntBASIC14.15□□□□□ -0.14
TMIGD3P0DMS9 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.15□□□□□ -0.14
TMIGD3P0DMS9 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.15□□□□□ -0.14
TMIGD3P0DMS9 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.15□□□□□ -0.14
TMIGD3P0DMS9 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
TMIGD3P0DMS9 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TMIGD3P0DMS9 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TMIGD3P0DMS9 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TMIGD3P0DMS9 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TMIGD3P0DMS9 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TMIGD3P0DMS9 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TMIGD3P0DMS9 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TMIGD3P0DMS9 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TMIGD3P0DMS9 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.15
TMIGD3P0DMS9 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
TMIGD3P0DMS9 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMIGD3P0DMS9 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
TMIGD3P0DMS9 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
TMIGD3P0DMS9 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMIGD3P0DMS9 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TMIGD3P0DMS9 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMIGD3P0DMS9 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TMIGD3P0DMS9 BNIP3P1-202ENST00000550043 1585 ntBASIC14.14□□□□□ -0.15
TMIGD3P0DMS9 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
TMIGD3P0DMS9 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
TMIGD3P0DMS9 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMIGD3P0DMS9 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMIGD3P0DMS9 AP001282.1-201ENST00000531301 1499 ntBASIC14.14□□□□□ -0.15
TMIGD3P0DMS9 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TMIGD3P0DMS9 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.14□□□□□ -0.15
TMIGD3P0DMS9 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMIGD3P0DMS9 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms