Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DQB2P05538 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DQB2P05538 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.76■□□□□ 0.11
HLA-DQB2P05538 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DQB2P05538 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.76■□□□□ 0.11
HLA-DQB2P05538 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
HLA-DQB2P05538 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
HLA-DQB2P05538 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DQB2P05538 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DQB2P05538 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DQB2P05538 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
HLA-DQB2P05538 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DQB2P05538 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DQB2P05538 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DQB2P05538 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DQB2P05538 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DQB2P05538 AC002472.2-201ENST00000442739 958 ntBASIC15.76■□□□□ 0.11
HLA-DQB2P05538 FAM207CP-201ENST00000443486 507 ntBASIC15.76■□□□□ 0.11
HLA-DQB2P05538 FAM86LP-201ENST00000478302 853 ntBASIC15.76■□□□□ 0.11
HLA-DQB2P05538 AC055876.2-201ENST00000531834 546 ntBASIC15.76■□□□□ 0.11
HLA-DQB2P05538 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DQB2P05538 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.76■□□□□ 0.11
HLA-DQB2P05538 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.76■□□□□ 0.11
HLA-DQB2P05538 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.76■□□□□ 0.11
HLA-DQB2P05538 AL132655.2-201ENST00000596276 594 ntBASIC15.76■□□□□ 0.11
HLA-DQB2P05538 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DQB2P05538 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DQB2P05538 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.76■□□□□ 0.11
HLA-DQB2P05538 AC008761.3-201ENST00000624803 892 ntBASIC15.76■□□□□ 0.11
HLA-DQB2P05538 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.76■□□□□ 0.11
HLA-DQB2P05538 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.76■□□□□ 0.11
HLA-DQB2P05538 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DQB2P05538 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DQB2P05538 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.76■□□□□ 0.11
HLA-DQB2P05538 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DQB2P05538 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DQB2P05538 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DQB2P05538 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
HLA-DQB2P05538 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.76■□□□□ 0.11
HLA-DQB2P05538 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.76■□□□□ 0.11
HLA-DQB2P05538 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DQB2P05538 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DQB2P05538 SLC7A15P-201ENST00000424028 1363 ntBASIC15.75■□□□□ 0.11
HLA-DQB2P05538 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DQB2P05538 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DQB2P05538 AP002414.2-201ENST00000591780 3365 ntBASIC15.75■□□□□ 0.11
HLA-DQB2P05538 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DQB2P05538 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DQB2P05538 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
HLA-DQB2P05538 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
HLA-DQB2P05538 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DQB2P05538 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DQB2P05538 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DQB2P05538 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DQB2P05538 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DQB2P05538 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DQB2P05538 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.75■□□□□ 0.11
HLA-DQB2P05538 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
HLA-DQB2P05538 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.75■□□□□ 0.11
HLA-DQB2P05538 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
HLA-DQB2P05538 RN7SL399P-201ENST00000471648 279 ntBASIC15.75■□□□□ 0.11
HLA-DQB2P05538 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.75■□□□□ 0.11
HLA-DQB2P05538 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.75■□□□□ 0.11
HLA-DQB2P05538 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.75■□□□□ 0.11
HLA-DQB2P05538 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.75■□□□□ 0.11
HLA-DQB2P05538 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
HLA-DQB2P05538 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
HLA-DQB2P05538 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.75■□□□□ 0.11
HLA-DQB2P05538 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.75■□□□□ 0.11
HLA-DQB2P05538 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
HLA-DQB2P05538 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DQB2P05538 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DQB2P05538 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DQB2P05538 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DQB2P05538 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DQB2P05538 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DQB2P05538 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DQB2P05538 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.75■□□□□ 0.11
HLA-DQB2P05538 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DQB2P05538 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.75■□□□□ 0.11
HLA-DQB2P05538 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
HLA-DQB2P05538 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DQB2P05538 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DQB2P05538 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
HLA-DQB2P05538 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
HLA-DQB2P05538 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
HLA-DQB2P05538 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DQB2P05538 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DQB2P05538 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DQB2P05538 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
HLA-DQB2P05538 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.74■□□□□ 0.11
HLA-DQB2P05538 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.74■□□□□ 0.11
HLA-DQB2P05538 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.74■□□□□ 0.11
HLA-DQB2P05538 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DQB2P05538 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DQB2P05538 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DQB2P05538 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DQB2P05538 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DQB2P05538 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DQB2P05538 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms