Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 DGCR5-201ENST00000399539 862 ntBASIC18.71■□□□□ 0.59
APPP05067 AC098850.1-201ENST00000419919 790 ntBASIC18.71■□□□□ 0.59
APPP05067 FAM86LP-201ENST00000478302 853 ntBASIC18.71■□□□□ 0.59
APPP05067 AP005018.1-201ENST00000525475 301 ntBASIC18.71■□□□□ 0.59
APPP05067 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.71■□□□□ 0.59
APPP05067 RRP7BP-205ENST00000566851 833 ntBASIC18.71■□□□□ 0.59
APPP05067 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
APPP05067 AC105233.6-201ENST00000642093 218 ntBASIC18.71■□□□□ 0.59
APPP05067 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.71■□□□□ 0.59
APPP05067 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
APPP05067 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
APPP05067 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
APPP05067 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC18.71■□□□□ 0.59
APPP05067 AC009090.5-201ENST00000624886 2285 ntBASIC18.71■□□□□ 0.59
APPP05067 TCAF2P1-201ENST00000291129 2421 ntBASIC18.71■□□□□ 0.59
APPP05067 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
APPP05067 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
APPP05067 CYP2AB1P-202ENST00000454440 1456 ntBASIC18.71■□□□□ 0.59
APPP05067 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
APPP05067 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
APPP05067 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
APPP05067 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
APPP05067 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.7■□□□□ 0.58
APPP05067 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
APPP05067 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
APPP05067 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
APPP05067 TP73-209ENST00000603362 1668 ntTSL 5 BASIC18.7■□□□□ 0.58
APPP05067 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
APPP05067 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
APPP05067 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
APPP05067 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
APPP05067 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
APPP05067 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
APPP05067 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.7■□□□□ 0.58
APPP05067 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.7■□□□□ 0.58
APPP05067 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
APPP05067 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.7■□□□□ 0.58
APPP05067 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.7■□□□□ 0.58
APPP05067 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.7■□□□□ 0.58
APPP05067 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.7■□□□□ 0.58
APPP05067 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.7■□□□□ 0.58
APPP05067 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.7■□□□□ 0.58
APPP05067 AL391069.4-201ENST00000609583 481 ntBASIC18.7■□□□□ 0.58
APPP05067 NID2-208ENST00000617139 3827 ntTSL 5 BASIC18.7■□□□□ 0.58
APPP05067 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
APPP05067 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
APPP05067 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
APPP05067 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.7■□□□□ 0.58
APPP05067 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
APPP05067 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
APPP05067 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
APPP05067 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
APPP05067 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
APPP05067 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.69■□□□□ 0.58
APPP05067 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.69■□□□□ 0.58
APPP05067 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
APPP05067 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
APPP05067 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
APPP05067 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
APPP05067 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
APPP05067 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
APPP05067 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
APPP05067 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
APPP05067 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.69■□□□□ 0.58
APPP05067 RN7SL692P-201ENST00000464677 288 ntBASIC18.69■□□□□ 0.58
APPP05067 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.69■□□□□ 0.58
APPP05067 WASH4P-201ENST00000564273 1246 ntBASIC18.69■□□□□ 0.58
APPP05067 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.69■□□□□ 0.58
APPP05067 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
APPP05067 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
APPP05067 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
APPP05067 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
APPP05067 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
APPP05067 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
APPP05067 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
APPP05067 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
APPP05067 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.69■□□□□ 0.58
APPP05067 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
APPP05067 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
APPP05067 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
APPP05067 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
APPP05067 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
APPP05067 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC18.69■□□□□ 0.58
APPP05067 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC18.69■□□□□ 0.58
APPP05067 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
APPP05067 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
APPP05067 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC18.68■□□□□ 0.58
APPP05067 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC18.68■□□□□ 0.58
APPP05067 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
APPP05067 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APPP05067 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC18.68■□□□□ 0.58
APPP05067 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
APPP05067 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APPP05067 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC18.68■□□□□ 0.58
APPP05067 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
APPP05067 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.68■□□□□ 0.58
APPP05067 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
APPP05067 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC18.68■□□□□ 0.58
APPP05067 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
APPP05067 AL133267.1-201ENST00000398220 340 ntBASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms