Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PDGFBP01127 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDGFBP01127 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.43■□□□□ 0.06
PDGFBP01127 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.43■□□□□ 0.06
PDGFBP01127 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
PDGFBP01127 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.43■□□□□ 0.06
PDGFBP01127 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDGFBP01127 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
PDGFBP01127 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PDGFBP01127 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
PDGFBP01127 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
PDGFBP01127 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
PDGFBP01127 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.43■□□□□ 0.06
PDGFBP01127 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC15.43■□□□□ 0.06
PDGFBP01127 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDGFBP01127 CLUHP2-201ENST00000426660 1303 ntBASIC15.43■□□□□ 0.06
PDGFBP01127 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PDGFBP01127 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDGFBP01127 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
PDGFBP01127 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
PDGFBP01127 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.42■□□□□ 0.06
PDGFBP01127 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
PDGFBP01127 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PDGFBP01127 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.42■□□□□ 0.06
PDGFBP01127 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.42■□□□□ 0.06
PDGFBP01127 CAP2P1-201ENST00000557743 1390 ntBASIC15.42■□□□□ 0.06
PDGFBP01127 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PDGFBP01127 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
PDGFBP01127 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC15.42■□□□□ 0.06
PDGFBP01127 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.42■□□□□ 0.06
PDGFBP01127 IDS-203ENST00000428056 1213 ntTSL 2 BASIC15.42■□□□□ 0.06
PDGFBP01127 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PDGFBP01127 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC15.42■□□□□ 0.06
PDGFBP01127 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC15.42■□□□□ 0.06
PDGFBP01127 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.42■□□□□ 0.06
PDGFBP01127 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
PDGFBP01127 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC15.42■□□□□ 0.06
PDGFBP01127 DNM1P30-201ENST00000563586 452 ntBASIC15.42■□□□□ 0.06
PDGFBP01127 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC15.42■□□□□ 0.06
PDGFBP01127 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PDGFBP01127 MIR4313-201ENST00000580760 101 ntBASIC15.42■□□□□ 0.06
PDGFBP01127 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC15.42■□□□□ 0.06
PDGFBP01127 AC007881.3-201ENST00000608897 607 ntBASIC15.42■□□□□ 0.06
PDGFBP01127 AC138466.3-201ENST00000619983 221 ntBASIC15.42■□□□□ 0.06
PDGFBP01127 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC15.42■□□□□ 0.06
PDGFBP01127 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PDGFBP01127 ALOX12P2-203ENST00000570921 1945 ntBASIC15.42■□□□□ 0.06
PDGFBP01127 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.42■□□□□ 0.06
PDGFBP01127 AC018695.7-201ENST00000624587 2492 ntBASIC15.42■□□□□ 0.06
PDGFBP01127 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PDGFBP01127 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PDGFBP01127 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.42■□□□□ 0.06
PDGFBP01127 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PDGFBP01127 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PDGFBP01127 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
PDGFBP01127 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.42■□□□□ 0.06
PDGFBP01127 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PDGFBP01127 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.42■□□□□ 0.06
PDGFBP01127 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PDGFBP01127 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PDGFBP01127 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PDGFBP01127 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PDGFBP01127 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDGFBP01127 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDGFBP01127 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PDGFBP01127 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PDGFBP01127 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
PDGFBP01127 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDGFBP01127 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.41■□□□□ 0.06
PDGFBP01127 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.41■□□□□ 0.06
PDGFBP01127 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDGFBP01127 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDGFBP01127 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDGFBP01127 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDGFBP01127 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDGFBP01127 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PDGFBP01127 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDGFBP01127 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PDGFBP01127 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PDGFBP01127 RPL8P2-201ENST00000430538 502 ntBASIC15.41■□□□□ 0.06
PDGFBP01127 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC15.41■□□□□ 0.06
PDGFBP01127 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PDGFBP01127 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.41■□□□□ 0.06
PDGFBP01127 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC15.41■□□□□ 0.06
PDGFBP01127 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.41■□□□□ 0.06
PDGFBP01127 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PDGFBP01127 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC15.41■□□□□ 0.06
PDGFBP01127 AC009955.4-201ENST00000597192 544 ntBASIC15.41■□□□□ 0.06
PDGFBP01127 AL358472.3-201ENST00000608147 415 ntBASIC15.41■□□□□ 0.06
PDGFBP01127 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.41■□□□□ 0.06
PDGFBP01127 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.41■□□□□ 0.06
PDGFBP01127 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PDGFBP01127 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDGFBP01127 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PDGFBP01127 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC15.41■□□□□ 0.06
PDGFBP01127 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDGFBP01127 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDGFBP01127 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDGFBP01127 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.41■□□□□ 0.06
PDGFBP01127 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms