Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TIMP1P01033 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TIMP1P01033 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TIMP1P01033 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TIMP1P01033 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.55■□□□□ 0.24
TIMP1P01033 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TIMP1P01033 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
TIMP1P01033 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TIMP1P01033 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.55■□□□□ 0.24
TIMP1P01033 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.55■□□□□ 0.24
TIMP1P01033 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TIMP1P01033 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TIMP1P01033 AC124067.4-201ENST00000519691 2379 ntBASIC16.55■□□□□ 0.24
TIMP1P01033 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TIMP1P01033 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.55■□□□□ 0.24
TIMP1P01033 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TIMP1P01033 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TIMP1P01033 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TIMP1P01033 TBC1D3J-201ENST00000620719 1426 ntBASIC16.54■□□□□ 0.24
TIMP1P01033 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TIMP1P01033 AC026471.1-201ENST00000564629 3026 ntBASIC16.54■□□□□ 0.24
TIMP1P01033 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.54■□□□□ 0.24
TIMP1P01033 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TIMP1P01033 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TIMP1P01033 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TIMP1P01033 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TIMP1P01033 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
TIMP1P01033 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TIMP1P01033 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TIMP1P01033 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TIMP1P01033 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TIMP1P01033 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TIMP1P01033 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC16.54■□□□□ 0.24
TIMP1P01033 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TIMP1P01033 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TIMP1P01033 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TIMP1P01033 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TIMP1P01033 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC16.54■□□□□ 0.24
TIMP1P01033 AC078991.1-201ENST00000437297 610 ntBASIC16.54■□□□□ 0.24
TIMP1P01033 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TIMP1P01033 AC073150.1-201ENST00000450406 1084 ntBASIC16.54■□□□□ 0.24
TIMP1P01033 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC16.54■□□□□ 0.24
TIMP1P01033 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TIMP1P01033 RCC2P8-201ENST00000502779 1035 ntBASIC16.54■□□□□ 0.24
TIMP1P01033 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC16.54■□□□□ 0.24
TIMP1P01033 DUX4L46-201ENST00000566845 751 ntBASIC16.54■□□□□ 0.24
TIMP1P01033 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.54■□□□□ 0.24
TIMP1P01033 AC002472.3-201ENST00000640124 621 ntBASIC16.54■□□□□ 0.24
TIMP1P01033 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TIMP1P01033 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TIMP1P01033 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TIMP1P01033 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.54■□□□□ 0.24
TIMP1P01033 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TIMP1P01033 FLJ38576-201ENST00000623820 2459 ntBASIC16.54■□□□□ 0.24
TIMP1P01033 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TIMP1P01033 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TIMP1P01033 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TIMP1P01033 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TIMP1P01033 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TIMP1P01033 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.53■□□□□ 0.24
TIMP1P01033 SHC1P1-201ENST00000425230 1745 ntBASIC16.53■□□□□ 0.24
TIMP1P01033 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TIMP1P01033 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
TIMP1P01033 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
TIMP1P01033 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
TIMP1P01033 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
TIMP1P01033 PKD1P1-201ENST00000458669 6805 ntBASIC16.53■□□□□ 0.24
TIMP1P01033 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TIMP1P01033 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TIMP1P01033 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TIMP1P01033 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TIMP1P01033 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TIMP1P01033 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.53■□□□□ 0.24
TIMP1P01033 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TIMP1P01033 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TIMP1P01033 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TIMP1P01033 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
TIMP1P01033 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.53■□□□□ 0.24
TIMP1P01033 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.53■□□□□ 0.24
TIMP1P01033 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TIMP1P01033 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TIMP1P01033 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TIMP1P01033 AL627231.1-201ENST00000394467 1125 ntBASIC16.53■□□□□ 0.24
TIMP1P01033 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TIMP1P01033 RN7SKP175-201ENST00000408472 289 ntBASIC16.53■□□□□ 0.24
TIMP1P01033 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.53■□□□□ 0.24
TIMP1P01033 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TIMP1P01033 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.53■□□□□ 0.24
TIMP1P01033 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC16.53■□□□□ 0.24
TIMP1P01033 AC009779.1-201ENST00000551138 283 ntBASIC16.53■□□□□ 0.24
TIMP1P01033 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
TIMP1P01033 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC16.53■□□□□ 0.24
TIMP1P01033 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TIMP1P01033 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC16.53■□□□□ 0.24
TIMP1P01033 AC051619.9-201ENST00000623237 597 ntBASIC16.53■□□□□ 0.24
TIMP1P01033 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TIMP1P01033 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TIMP1P01033 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TIMP1P01033 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.53■□□□□ 0.24
TIMP1P01033 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms