Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TOP3BO95985 AC099568.2-201ENST00000609194 695 ntBASIC16.02■□□□□ 0.16
TOP3BO95985 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TOP3BO95985 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TOP3BO95985 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.02■□□□□ 0.15
TOP3BO95985 AL589702.1-201ENST00000641229 1509 ntBASIC16.02■□□□□ 0.15
TOP3BO95985 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TOP3BO95985 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TOP3BO95985 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.02■□□□□ 0.15
TOP3BO95985 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TOP3BO95985 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
TOP3BO95985 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TOP3BO95985 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
TOP3BO95985 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TOP3BO95985 CICP24-201ENST00000605464 2705 ntBASIC16.02■□□□□ 0.15
TOP3BO95985 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TOP3BO95985 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.02■□□□□ 0.15
TOP3BO95985 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TOP3BO95985 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TOP3BO95985 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TOP3BO95985 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TOP3BO95985 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TOP3BO95985 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TOP3BO95985 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TOP3BO95985 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
TOP3BO95985 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TOP3BO95985 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TOP3BO95985 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
TOP3BO95985 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TOP3BO95985 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TOP3BO95985 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TOP3BO95985 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.01■□□□□ 0.15
TOP3BO95985 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TOP3BO95985 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TOP3BO95985 AC087499.6-201ENST00000411576 835 ntBASIC16.01■□□□□ 0.15
TOP3BO95985 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.01■□□□□ 0.15
TOP3BO95985 CROCCP4-201ENST00000457096 498 ntBASIC16.01■□□□□ 0.15
TOP3BO95985 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TOP3BO95985 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.01■□□□□ 0.15
TOP3BO95985 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.01■□□□□ 0.15
TOP3BO95985 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.01■□□□□ 0.15
TOP3BO95985 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
TOP3BO95985 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.01■□□□□ 0.15
TOP3BO95985 AL589739.1-201ENST00000607720 493 ntBASIC16.01■□□□□ 0.15
TOP3BO95985 AC133552.6-201ENST00000613406 534 ntBASIC16.01■□□□□ 0.15
TOP3BO95985 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.01■□□□□ 0.15
TOP3BO95985 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TOP3BO95985 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.01■□□□□ 0.15
TOP3BO95985 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
TOP3BO95985 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TOP3BO95985 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
TOP3BO95985 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TOP3BO95985 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.01■□□□□ 0.15
TOP3BO95985 AC006058.4-201ENST00000624016 1670 ntBASIC16.01■□□□□ 0.15
TOP3BO95985 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TOP3BO95985 AC087481.3-201ENST00000602886 1894 ntBASIC16.01■□□□□ 0.15
TOP3BO95985 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.01■□□□□ 0.15
TOP3BO95985 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TOP3BO95985 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TOP3BO95985 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TOP3BO95985 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.01■□□□□ 0.15
TOP3BO95985 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TOP3BO95985 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TOP3BO95985 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16■□□□□ 0.15
TOP3BO95985 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16■□□□□ 0.15
TOP3BO95985 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TOP3BO95985 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16■□□□□ 0.15
TOP3BO95985 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TOP3BO95985 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16■□□□□ 0.15
TOP3BO95985 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16■□□□□ 0.15
TOP3BO95985 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TOP3BO95985 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16■□□□□ 0.15
TOP3BO95985 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16■□□□□ 0.15
TOP3BO95985 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TOP3BO95985 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
TOP3BO95985 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16■□□□□ 0.15
TOP3BO95985 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TOP3BO95985 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16■□□□□ 0.15
TOP3BO95985 AC011477.6-201ENST00000604980 1927 ntBASIC16■□□□□ 0.15
TOP3BO95985 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16■□□□□ 0.15
TOP3BO95985 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
TOP3BO95985 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16■□□□□ 0.15
TOP3BO95985 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16■□□□□ 0.15
TOP3BO95985 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
TOP3BO95985 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TOP3BO95985 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TOP3BO95985 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16■□□□□ 0.15
TOP3BO95985 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TOP3BO95985 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TOP3BO95985 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TOP3BO95985 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TOP3BO95985 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16■□□□□ 0.15
TOP3BO95985 OSM-203ENST00000403463 464 ntTSL 3 BASIC16■□□□□ 0.15
TOP3BO95985 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16■□□□□ 0.15
TOP3BO95985 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
TOP3BO95985 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16■□□□□ 0.15
TOP3BO95985 KRT18P34-201ENST00000488218 1270 ntBASIC16■□□□□ 0.15
TOP3BO95985 SPDYE18-201ENST00000510091 1050 ntBASIC16■□□□□ 0.15
TOP3BO95985 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16■□□□□ 0.15
TOP3BO95985 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms