Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.41■□□□□ 0.38
GGPS1O95749 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GGPS1O95749 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GGPS1O95749 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GGPS1O95749 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GGPS1O95749 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GGPS1O95749 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
GGPS1O95749 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
GGPS1O95749 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GGPS1O95749 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.41■□□□□ 0.38
GGPS1O95749 C2orf27AP3-201ENST00000434123 579 ntBASIC17.41■□□□□ 0.38
GGPS1O95749 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GGPS1O95749 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
GGPS1O95749 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GGPS1O95749 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.41■□□□□ 0.38
GGPS1O95749 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GGPS1O95749 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.41■□□□□ 0.38
GGPS1O95749 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.41■□□□□ 0.38
GGPS1O95749 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.41■□□□□ 0.38
GGPS1O95749 AL354718.3-201ENST00000616414 581 ntBASIC17.41■□□□□ 0.38
GGPS1O95749 BX539320.1-201ENST00000623759 877 ntBASIC17.41■□□□□ 0.38
GGPS1O95749 CR382287.1-201ENST00000623954 586 ntBASIC17.41■□□□□ 0.38
GGPS1O95749 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.41■□□□□ 0.38
GGPS1O95749 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GGPS1O95749 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GGPS1O95749 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
GGPS1O95749 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
GGPS1O95749 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GGPS1O95749 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
GGPS1O95749 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.41■□□□□ 0.38
GGPS1O95749 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GGPS1O95749 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.41■□□□□ 0.38
GGPS1O95749 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GGPS1O95749 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.41■□□□□ 0.38
GGPS1O95749 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.41■□□□□ 0.38
GGPS1O95749 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
GGPS1O95749 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GGPS1O95749 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
GGPS1O95749 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
GGPS1O95749 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GGPS1O95749 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
GGPS1O95749 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GGPS1O95749 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.4■□□□□ 0.38
GGPS1O95749 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
GGPS1O95749 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GGPS1O95749 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GGPS1O95749 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GGPS1O95749 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GGPS1O95749 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GGPS1O95749 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
GGPS1O95749 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.4■□□□□ 0.38
GGPS1O95749 FAM86MP-201ENST00000340703 885 ntBASIC17.4■□□□□ 0.38
GGPS1O95749 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.4■□□□□ 0.38
GGPS1O95749 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GGPS1O95749 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.4■□□□□ 0.38
GGPS1O95749 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
GGPS1O95749 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GGPS1O95749 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.4■□□□□ 0.38
GGPS1O95749 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.4■□□□□ 0.38
GGPS1O95749 KRT18P25-201ENST00000508931 1278 ntBASIC17.4■□□□□ 0.38
GGPS1O95749 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.4■□□□□ 0.38
GGPS1O95749 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.4■□□□□ 0.38
GGPS1O95749 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GGPS1O95749 TECR-220ENST00000600083 1204 ntTSL 2 BASIC17.4■□□□□ 0.38
GGPS1O95749 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.4■□□□□ 0.38
GGPS1O95749 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GGPS1O95749 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GGPS1O95749 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GGPS1O95749 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GGPS1O95749 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GGPS1O95749 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GGPS1O95749 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.4■□□□□ 0.38
GGPS1O95749 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
GGPS1O95749 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GGPS1O95749 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
GGPS1O95749 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.39■□□□□ 0.38
GGPS1O95749 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.39■□□□□ 0.38
GGPS1O95749 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.39■□□□□ 0.38
GGPS1O95749 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.39■□□□□ 0.38
GGPS1O95749 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.39■□□□□ 0.37
GGPS1O95749 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GGPS1O95749 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.39■□□□□ 0.37
GGPS1O95749 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
GGPS1O95749 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.39■□□□□ 0.37
GGPS1O95749 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GGPS1O95749 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GGPS1O95749 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GGPS1O95749 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GGPS1O95749 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.39■□□□□ 0.37
GGPS1O95749 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
GGPS1O95749 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GGPS1O95749 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GGPS1O95749 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GGPS1O95749 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GGPS1O95749 AC026954.1-201ENST00000429771 1293 ntBASIC17.39■□□□□ 0.37
GGPS1O95749 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.39■□□□□ 0.37
GGPS1O95749 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.39■□□□□ 0.37
GGPS1O95749 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.39■□□□□ 0.37
GGPS1O95749 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
GGPS1O95749 RNA5SP412-201ENST00000516234 123 ntBASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms