Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CNOT4O95628 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CNOT4O95628 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CNOT4O95628 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CNOT4O95628 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CNOT4O95628 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.91□□□□□ -0.18
CNOT4O95628 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.91□□□□□ -0.18
CNOT4O95628 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.91□□□□□ -0.18
CNOT4O95628 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
CNOT4O95628 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.91□□□□□ -0.18
CNOT4O95628 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.91□□□□□ -0.18
CNOT4O95628 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CNOT4O95628 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CNOT4O95628 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CNOT4O95628 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CNOT4O95628 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.91□□□□□ -0.18
CNOT4O95628 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CNOT4O95628 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.91□□□□□ -0.18
CNOT4O95628 AC098614.1-201ENST00000368528 745 ntBASIC13.91□□□□□ -0.18
CNOT4O95628 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
CNOT4O95628 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.91□□□□□ -0.18
CNOT4O95628 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.91□□□□□ -0.18
CNOT4O95628 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.91□□□□□ -0.18
CNOT4O95628 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.91□□□□□ -0.18
CNOT4O95628 AC140912.1-201ENST00000577171 1054 ntBASIC13.91□□□□□ -0.18
CNOT4O95628 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.91□□□□□ -0.18
CNOT4O95628 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CNOT4O95628 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.91□□□□□ -0.18
CNOT4O95628 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.91□□□□□ -0.18
CNOT4O95628 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.91□□□□□ -0.18
CNOT4O95628 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.91□□□□□ -0.18
CNOT4O95628 OR2I1P-209ENST00000641730 5365 ntBASIC13.91□□□□□ -0.18
CNOT4O95628 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
CNOT4O95628 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CNOT4O95628 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CNOT4O95628 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.91□□□□□ -0.18
CNOT4O95628 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CNOT4O95628 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CNOT4O95628 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CNOT4O95628 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CNOT4O95628 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CNOT4O95628 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CNOT4O95628 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CNOT4O95628 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CNOT4O95628 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CNOT4O95628 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CNOT4O95628 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CNOT4O95628 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CNOT4O95628 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CNOT4O95628 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CNOT4O95628 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CNOT4O95628 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CNOT4O95628 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CNOT4O95628 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CNOT4O95628 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CNOT4O95628 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CNOT4O95628 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CNOT4O95628 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.9□□□□□ -0.18
CNOT4O95628 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.9□□□□□ -0.18
CNOT4O95628 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CNOT4O95628 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.9□□□□□ -0.18
CNOT4O95628 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.9□□□□□ -0.18
CNOT4O95628 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CNOT4O95628 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CNOT4O95628 AC112504.1-201ENST00000623415 1841 ntBASIC13.9□□□□□ -0.18
CNOT4O95628 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CNOT4O95628 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CNOT4O95628 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CNOT4O95628 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.9□□□□□ -0.18
CNOT4O95628 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CNOT4O95628 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.9□□□□□ -0.18
CNOT4O95628 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.9□□□□□ -0.18
CNOT4O95628 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.9□□□□□ -0.18
CNOT4O95628 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.9□□□□□ -0.18
CNOT4O95628 AC074338.1-201ENST00000416825 156 ntBASIC13.9□□□□□ -0.18
CNOT4O95628 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.9□□□□□ -0.18
CNOT4O95628 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.9□□□□□ -0.18
CNOT4O95628 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.9□□□□□ -0.18
CNOT4O95628 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.9□□□□□ -0.18
CNOT4O95628 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.9□□□□□ -0.18
CNOT4O95628 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CNOT4O95628 SPDYE18-201ENST00000510091 1050 ntBASIC13.9□□□□□ -0.18
CNOT4O95628 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CNOT4O95628 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.9□□□□□ -0.18
CNOT4O95628 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.9□□□□□ -0.18
CNOT4O95628 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.9□□□□□ -0.18
CNOT4O95628 API5-211ENST00000534695 560 ntTSL 5 BASIC13.9□□□□□ -0.18
CNOT4O95628 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CNOT4O95628 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.9□□□□□ -0.18
CNOT4O95628 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.9□□□□□ -0.18
CNOT4O95628 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.9□□□□□ -0.18
CNOT4O95628 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
CNOT4O95628 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CNOT4O95628 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CNOT4O95628 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CNOT4O95628 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CNOT4O95628 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CNOT4O95628 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CNOT4O95628 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CNOT4O95628 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms