Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.36■□□□□ 0.37
CLSTN1O94985 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLSTN1O94985 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.36■□□□□ 0.37
CLSTN1O94985 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLSTN1O94985 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLSTN1O94985 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.36■□□□□ 0.37
CLSTN1O94985 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC17.36■□□□□ 0.37
CLSTN1O94985 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CLSTN1O94985 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLSTN1O94985 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
CLSTN1O94985 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLSTN1O94985 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.36■□□□□ 0.37
CLSTN1O94985 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLSTN1O94985 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLSTN1O94985 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLSTN1O94985 SRC-202ENST00000373558 4304 ntTSL 5 BASIC17.35■□□□□ 0.37
CLSTN1O94985 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.35■□□□□ 0.37
CLSTN1O94985 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CLSTN1O94985 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLSTN1O94985 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLSTN1O94985 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.35■□□□□ 0.37
CLSTN1O94985 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.35■□□□□ 0.37
CLSTN1O94985 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.35■□□□□ 0.37
CLSTN1O94985 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLSTN1O94985 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC17.35■□□□□ 0.37
CLSTN1O94985 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLSTN1O94985 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLSTN1O94985 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CLSTN1O94985 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLSTN1O94985 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.35■□□□□ 0.37
CLSTN1O94985 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLSTN1O94985 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLSTN1O94985 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.35■□□□□ 0.37
CLSTN1O94985 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.35■□□□□ 0.37
CLSTN1O94985 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.35■□□□□ 0.37
CLSTN1O94985 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLSTN1O94985 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.35■□□□□ 0.37
CLSTN1O94985 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.35■□□□□ 0.37
CLSTN1O94985 AC093512.1-201ENST00000617969 520 ntBASIC17.35■□□□□ 0.37
CLSTN1O94985 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLSTN1O94985 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLSTN1O94985 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLSTN1O94985 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLSTN1O94985 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLSTN1O94985 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLSTN1O94985 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLSTN1O94985 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLSTN1O94985 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLSTN1O94985 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLSTN1O94985 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLSTN1O94985 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLSTN1O94985 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLSTN1O94985 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.35■□□□□ 0.37
CLSTN1O94985 TP73-201ENST00000346387 4854 ntTSL 5 BASIC17.35■□□□□ 0.37
CLSTN1O94985 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC17.35■□□□□ 0.37
CLSTN1O94985 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC17.34■□□□□ 0.37
CLSTN1O94985 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CLSTN1O94985 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.34■□□□□ 0.37
CLSTN1O94985 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
CLSTN1O94985 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CLSTN1O94985 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLSTN1O94985 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CLSTN1O94985 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CLSTN1O94985 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLSTN1O94985 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLSTN1O94985 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.34■□□□□ 0.37
CLSTN1O94985 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.34■□□□□ 0.37
CLSTN1O94985 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLSTN1O94985 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLSTN1O94985 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CLSTN1O94985 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.34■□□□□ 0.37
CLSTN1O94985 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.34■□□□□ 0.37
CLSTN1O94985 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.34■□□□□ 0.37
CLSTN1O94985 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.34■□□□□ 0.37
CLSTN1O94985 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.34■□□□□ 0.37
CLSTN1O94985 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC17.34■□□□□ 0.37
CLSTN1O94985 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CLSTN1O94985 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.34■□□□□ 0.37
CLSTN1O94985 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLSTN1O94985 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLSTN1O94985 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.34■□□□□ 0.37
CLSTN1O94985 CETN4P-206ENST00000642099 2168 ntBASIC17.34■□□□□ 0.37
CLSTN1O94985 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLSTN1O94985 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLSTN1O94985 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLSTN1O94985 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
CLSTN1O94985 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CLSTN1O94985 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLSTN1O94985 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CLSTN1O94985 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLSTN1O94985 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC17.33■□□□□ 0.37
CLSTN1O94985 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CLSTN1O94985 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC17.33■□□□□ 0.37
CLSTN1O94985 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLSTN1O94985 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CLSTN1O94985 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
CLSTN1O94985 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CLSTN1O94985 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.33■□□□□ 0.37
CLSTN1O94985 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CLSTN1O94985 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms