Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 AL158212.4-201ENST00000624062 1286 ntBASIC15.04■□□□□ -0
CPNE3O75131 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.04■□□□□ -0
CPNE3O75131 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.04■□□□□ -0
CPNE3O75131 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE3O75131 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE3O75131 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE3O75131 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE3O75131 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE3O75131 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.04■□□□□ -0
CPNE3O75131 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE3O75131 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CPNE3O75131 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE3O75131 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE3O75131 AC126177.1-201ENST00000547829 2218 ntBASIC15.04■□□□□ -0
CPNE3O75131 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE3O75131 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CPNE3O75131 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CPNE3O75131 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.03■□□□□ -0
CPNE3O75131 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE3O75131 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE3O75131 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.03■□□□□ -0
CPNE3O75131 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.03■□□□□ -0
CPNE3O75131 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.03■□□□□ -0
CPNE3O75131 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CPNE3O75131 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE3O75131 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE3O75131 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.03■□□□□ -0
CPNE3O75131 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.03■□□□□ -0
CPNE3O75131 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.03■□□□□ -0
CPNE3O75131 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.03■□□□□ -0
CPNE3O75131 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CPNE3O75131 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CPNE3O75131 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.03■□□□□ -0
CPNE3O75131 ARSEP1-201ENST00000420443 635 ntBASIC15.03■□□□□ -0
CPNE3O75131 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.03■□□□□ -0
CPNE3O75131 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.03■□□□□ -0
CPNE3O75131 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.03■□□□□ -0
CPNE3O75131 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.03■□□□□ -0
CPNE3O75131 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.03■□□□□ -0
CPNE3O75131 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.03■□□□□ -0
CPNE3O75131 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.03■□□□□ -0
CPNE3O75131 MIR8072-201ENST00000614241 80 ntBASIC15.03■□□□□ -0
CPNE3O75131 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE3O75131 AC134407.2-201ENST00000625089 1978 ntBASIC15.03■□□□□ -0
CPNE3O75131 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE3O75131 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.03■□□□□ -0
CPNE3O75131 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE3O75131 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.03■□□□□ -0
CPNE3O75131 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE3O75131 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.03■□□□□ -0
CPNE3O75131 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.03■□□□□ -0
CPNE3O75131 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE3O75131 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.03■□□□□ -0
CPNE3O75131 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.03■□□□□ -0
CPNE3O75131 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.03■□□□□ -0
CPNE3O75131 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE3O75131 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.03■□□□□ -0
CPNE3O75131 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.03■□□□□ -0
CPNE3O75131 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE3O75131 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.03■□□□□ -0
CPNE3O75131 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.03■□□□□ -0
CPNE3O75131 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.03■□□□□ -0
CPNE3O75131 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE3O75131 AC006449.6-201ENST00000612330 2296 ntBASIC15.03■□□□□ -0
CPNE3O75131 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.03■□□□□ -0
CPNE3O75131 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.02■□□□□ -0
CPNE3O75131 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.02■□□□□ -0
CPNE3O75131 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CPNE3O75131 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CPNE3O75131 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CPNE3O75131 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.02■□□□□ -0
CPNE3O75131 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.02■□□□□ -0
CPNE3O75131 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.02■□□□□ -0
CPNE3O75131 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
CPNE3O75131 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CPNE3O75131 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CPNE3O75131 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CPNE3O75131 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CPNE3O75131 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.02■□□□□ -0
CPNE3O75131 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
CPNE3O75131 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.02■□□□□ -0
CPNE3O75131 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CPNE3O75131 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.02■□□□□ -0
CPNE3O75131 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.02■□□□□ -0
CPNE3O75131 PHKG1P2-201ENST00000457537 863 ntBASIC15.02■□□□□ -0
CPNE3O75131 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.02■□□□□ -0
CPNE3O75131 RN7SL399P-201ENST00000471648 279 ntBASIC15.02■□□□□ -0
CPNE3O75131 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.02■□□□□ -0
CPNE3O75131 IGHV3-71-201ENST00000523324 359 ntBASIC15.02■□□□□ -0
CPNE3O75131 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.02■□□□□ -0
CPNE3O75131 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.02■□□□□ -0
CPNE3O75131 AL450472.2-201ENST00000603663 1156 ntBASIC15.02■□□□□ -0
CPNE3O75131 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.02■□□□□ -0
CPNE3O75131 WFDC1-204ENST00000613603 549 ntBASIC15.02■□□□□ -0
CPNE3O75131 AL162274.1-201ENST00000617191 1098 ntBASIC15.02■□□□□ -0
CPNE3O75131 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.02■□□□□ -0
CPNE3O75131 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.02■□□□□ -0
CPNE3O75131 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.02■□□□□ -0
CPNE3O75131 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
CPNE3O75131 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms