Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCA5O60264 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCA5O60264 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC19.2■□□□□ 0.66
SMARCA5O60264 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC19.2■□□□□ 0.66
SMARCA5O60264 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
SMARCA5O60264 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SMARCA5O60264 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
SMARCA5O60264 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SMARCA5O60264 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SMARCA5O60264 LINC02228-204ENST00000642115 2962 ntBASIC19.19■□□□□ 0.66
SMARCA5O60264 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCA5O60264 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SMARCA5O60264 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
SMARCA5O60264 NME2-201ENST00000393183 568 ntTSL 2 BASIC19.19■□□□□ 0.66
SMARCA5O60264 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCA5O60264 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCA5O60264 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.19■□□□□ 0.66
SMARCA5O60264 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCA5O60264 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC19.19■□□□□ 0.66
SMARCA5O60264 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCA5O60264 TPRX2P-201ENST00000535362 881 ntBASIC19.19■□□□□ 0.66
SMARCA5O60264 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
SMARCA5O60264 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
SMARCA5O60264 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC19.19■□□□□ 0.66
SMARCA5O60264 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SMARCA5O60264 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCA5O60264 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCA5O60264 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCA5O60264 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCA5O60264 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC19.19■□□□□ 0.66
SMARCA5O60264 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCA5O60264 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCA5O60264 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCA5O60264 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCA5O60264 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCA5O60264 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCA5O60264 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SMARCA5O60264 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCA5O60264 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCA5O60264 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC19.19■□□□□ 0.66
SMARCA5O60264 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SMARCA5O60264 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCA5O60264 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCA5O60264 AL513477.1-201ENST00000602865 2407 ntBASIC19.19■□□□□ 0.66
SMARCA5O60264 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC19.18■□□□□ 0.66
SMARCA5O60264 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCA5O60264 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCA5O60264 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCA5O60264 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
SMARCA5O60264 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCA5O60264 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC19.18■□□□□ 0.66
SMARCA5O60264 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCA5O60264 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCA5O60264 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SMARCA5O60264 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCA5O60264 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC19.18■□□□□ 0.66
SMARCA5O60264 HMGN1P19-201ENST00000436976 333 ntBASIC19.18■□□□□ 0.66
SMARCA5O60264 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCA5O60264 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC19.18■□□□□ 0.66
SMARCA5O60264 RN7SL204P-201ENST00000582831 262 ntBASIC19.18■□□□□ 0.66
SMARCA5O60264 AL096865.1-201ENST00000606796 927 ntBASIC19.18■□□□□ 0.66
SMARCA5O60264 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.18■□□□□ 0.66
SMARCA5O60264 AJ011932.1-201ENST00000621707 465 ntBASIC19.18■□□□□ 0.66
SMARCA5O60264 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SMARCA5O60264 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCA5O60264 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SMARCA5O60264 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC19.18■□□□□ 0.66
SMARCA5O60264 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCA5O60264 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCA5O60264 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC19.18■□□□□ 0.66
SMARCA5O60264 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCA5O60264 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC19.18■□□□□ 0.66
SMARCA5O60264 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC19.18■□□□□ 0.66
SMARCA5O60264 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCA5O60264 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC19.18■□□□□ 0.66
SMARCA5O60264 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SMARCA5O60264 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCA5O60264 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCA5O60264 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCA5O60264 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCA5O60264 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCA5O60264 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCA5O60264 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SMARCA5O60264 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SMARCA5O60264 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SMARCA5O60264 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCA5O60264 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SMARCA5O60264 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SMARCA5O60264 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCA5O60264 AGAP7P-201ENST00000582299 2062 ntBASIC19.17■□□□□ 0.66
SMARCA5O60264 AGAP14-201ENST00000624701 2060 ntBASIC19.17■□□□□ 0.66
SMARCA5O60264 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCA5O60264 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCA5O60264 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCA5O60264 AC236430.1-201ENST00000402231 743 ntBASIC19.17■□□□□ 0.66
SMARCA5O60264 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC19.17■□□□□ 0.66
SMARCA5O60264 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCA5O60264 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.17■□□□□ 0.66
SMARCA5O60264 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC19.17■□□□□ 0.66
SMARCA5O60264 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms