Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHD2O14647 RNA5SP359-201ENST00000364838 113 ntBASIC21■□□□□ 0.95
CHD2O14647 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC21■□□□□ 0.95
CHD2O14647 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC21■□□□□ 0.95
CHD2O14647 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CHD2O14647 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
CHD2O14647 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC21■□□□□ 0.95
CHD2O14647 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC21■□□□□ 0.95
CHD2O14647 AC008825.2-201ENST00000603374 718 ntBASIC21■□□□□ 0.95
CHD2O14647 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC21■□□□□ 0.95
CHD2O14647 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
CHD2O14647 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC21■□□□□ 0.95
CHD2O14647 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHD2O14647 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHD2O14647 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC21■□□□□ 0.95
CHD2O14647 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
CHD2O14647 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC21■□□□□ 0.95
CHD2O14647 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHD2O14647 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CHD2O14647 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHD2O14647 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
CHD2O14647 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CHD2O14647 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC21■□□□□ 0.95
CHD2O14647 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC21■□□□□ 0.95
CHD2O14647 LINC02447-202ENST00000501888 2146 ntBASIC21■□□□□ 0.95
CHD2O14647 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21■□□□□ 0.95
CHD2O14647 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHD2O14647 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CHD2O14647 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CHD2O14647 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC20.99■□□□□ 0.95
CHD2O14647 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHD2O14647 MIR3188-201ENST00000583494 85 ntBASIC20.99■□□□□ 0.95
CHD2O14647 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CHD2O14647 MIR6720-201ENST00000611664 98 ntBASIC20.99■□□□□ 0.95
CHD2O14647 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHD2O14647 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHD2O14647 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHD2O14647 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
CHD2O14647 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CHD2O14647 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC20.99■□□□□ 0.95
CHD2O14647 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHD2O14647 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
CHD2O14647 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CHD2O14647 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHD2O14647 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CHD2O14647 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC20.99■□□□□ 0.95
CHD2O14647 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC20.99■□□□□ 0.95
CHD2O14647 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC20.99■□□□□ 0.95
CHD2O14647 AC005041.3-201ENST00000606287 649 ntBASIC20.99■□□□□ 0.95
CHD2O14647 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHD2O14647 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHD2O14647 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CHD2O14647 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
CHD2O14647 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC20.98■□□□□ 0.95
CHD2O14647 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHD2O14647 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC20.98■□□□□ 0.95
CHD2O14647 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC20.98■□□□□ 0.95
CHD2O14647 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHD2O14647 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC20.98■□□□□ 0.95
CHD2O14647 KRT18P9-201ENST00000604826 1300 ntBASIC20.98■□□□□ 0.95
CHD2O14647 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHD2O14647 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHD2O14647 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHD2O14647 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHD2O14647 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHD2O14647 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CHD2O14647 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CHD2O14647 LYPLA2P1-203ENST00000447689 696 ntBASIC20.98■□□□□ 0.95
CHD2O14647 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHD2O14647 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC20.98■□□□□ 0.95
CHD2O14647 NSD1-211ENST00000511258 809 ntTSL 3 BASIC20.98■□□□□ 0.95
CHD2O14647 POLD4-208ENST00000532830 904 ntTSL 3 BASIC20.98■□□□□ 0.95
CHD2O14647 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHD2O14647 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHD2O14647 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHD2O14647 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHD2O14647 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHD2O14647 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHD2O14647 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHD2O14647 AC009090.5-201ENST00000624886 2285 ntBASIC20.97■□□□□ 0.95
CHD2O14647 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHD2O14647 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHD2O14647 SLC9A7P1-202ENST00000556476 2239 ntBASIC20.97■□□□□ 0.95
CHD2O14647 AC026320.2-201ENST00000434379 478 ntBASIC20.97■□□□□ 0.95
CHD2O14647 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC20.97■□□□□ 0.95
CHD2O14647 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC20.97■□□□□ 0.95
CHD2O14647 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CHD2O14647 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CHD2O14647 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHD2O14647 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CHD2O14647 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHD2O14647 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC20.97■□□□□ 0.95
CHD2O14647 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHD2O14647 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHD2O14647 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC20.97■□□□□ 0.95
CHD2O14647 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHD2O14647 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC20.97■□□□□ 0.95
CHD2O14647 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC20.97■□□□□ 0.95
CHD2O14647 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHD2O14647 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms