Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.49■□□□□ 0.39
DDX39AO00148 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.49■□□□□ 0.39
DDX39AO00148 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX39AO00148 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.48■□□□□ 0.39
DDX39AO00148 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX39AO00148 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.48■□□□□ 0.39
DDX39AO00148 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX39AO00148 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
DDX39AO00148 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.48■□□□□ 0.39
DDX39AO00148 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
DDX39AO00148 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
DDX39AO00148 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX39AO00148 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX39AO00148 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX39AO00148 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX39AO00148 MSTO2P-201ENST00000314835 1709 ntBASIC17.48■□□□□ 0.39
DDX39AO00148 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX39AO00148 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
DDX39AO00148 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX39AO00148 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.48■□□□□ 0.39
DDX39AO00148 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DDX39AO00148 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.48■□□□□ 0.39
DDX39AO00148 AC026410.3-201ENST00000514280 936 ntBASIC17.48■□□□□ 0.39
DDX39AO00148 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.48■□□□□ 0.39
DDX39AO00148 KRT17P8-201ENST00000540749 863 ntBASIC17.48■□□□□ 0.39
DDX39AO00148 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DDX39AO00148 MIR5189-201ENST00000577370 114 ntBASIC17.48■□□□□ 0.39
DDX39AO00148 CLUHP6-201ENST00000580789 941 ntBASIC17.48■□□□□ 0.39
DDX39AO00148 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.48■□□□□ 0.39
DDX39AO00148 AC005252.2-201ENST00000624630 1141 ntBASIC17.48■□□□□ 0.39
DDX39AO00148 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX39AO00148 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX39AO00148 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.48■□□□□ 0.39
DDX39AO00148 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
DDX39AO00148 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.48■□□□□ 0.39
DDX39AO00148 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX39AO00148 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.48■□□□□ 0.39
DDX39AO00148 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DDX39AO00148 AC084364.1-201ENST00000551967 1556 ntBASIC17.48■□□□□ 0.39
DDX39AO00148 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX39AO00148 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.48■□□□□ 0.39
DDX39AO00148 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX39AO00148 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DDX39AO00148 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX39AO00148 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
DDX39AO00148 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX39AO00148 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DDX39AO00148 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX39AO00148 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DDX39AO00148 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX39AO00148 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX39AO00148 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DDX39AO00148 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DDX39AO00148 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX39AO00148 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.47■□□□□ 0.39
DDX39AO00148 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX39AO00148 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX39AO00148 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
DDX39AO00148 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX39AO00148 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX39AO00148 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
DDX39AO00148 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX39AO00148 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DDX39AO00148 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DDX39AO00148 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX39AO00148 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DDX39AO00148 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DDX39AO00148 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.47■□□□□ 0.39
DDX39AO00148 CROCCP4-201ENST00000457096 498 ntBASIC17.47■□□□□ 0.39
DDX39AO00148 GPR53P-205ENST00000457298 1084 ntBASIC17.47■□□□□ 0.39
DDX39AO00148 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX39AO00148 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DDX39AO00148 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
DDX39AO00148 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.47■□□□□ 0.39
DDX39AO00148 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX39AO00148 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX39AO00148 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX39AO00148 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX39AO00148 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
DDX39AO00148 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX39AO00148 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX39AO00148 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX39AO00148 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DDX39AO00148 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
DDX39AO00148 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DDX39AO00148 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.46■□□□□ 0.39
DDX39AO00148 AC105250.1-201ENST00000509378 2057 ntBASIC17.46■□□□□ 0.39
DDX39AO00148 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DDX39AO00148 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DDX39AO00148 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
DDX39AO00148 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DDX39AO00148 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
DDX39AO00148 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DDX39AO00148 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DDX39AO00148 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DDX39AO00148 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
DDX39AO00148 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
DDX39AO00148 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.46■□□□□ 0.39
DDX39AO00148 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
DDX39AO00148 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms