Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.05■□□□□ 0
AP4B1Q9Y6B7 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
AP4B1Q9Y6B7 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
AP4B1Q9Y6B7 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
AP4B1Q9Y6B7 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.05■□□□□ 0
AP4B1Q9Y6B7 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
AP4B1Q9Y6B7 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.05■□□□□ 0
AP4B1Q9Y6B7 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
AP4B1Q9Y6B7 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.05■□□□□ 0
AP4B1Q9Y6B7 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
AP4B1Q9Y6B7 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.05■□□□□ 0
AP4B1Q9Y6B7 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
AP4B1Q9Y6B7 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
AP4B1Q9Y6B7 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.05■□□□□ 0
AP4B1Q9Y6B7 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.05■□□□□ 0
AP4B1Q9Y6B7 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.05■□□□□ 0
AP4B1Q9Y6B7 AC107918.4-201ENST00000641966 3141 ntBASIC15.05■□□□□ -0
AP4B1Q9Y6B7 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
AP4B1Q9Y6B7 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.05■□□□□ -0
AP4B1Q9Y6B7 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.05■□□□□ -0
AP4B1Q9Y6B7 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
AP4B1Q9Y6B7 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.05■□□□□ -0
AP4B1Q9Y6B7 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.05■□□□□ -0
AP4B1Q9Y6B7 CEND1P1-201ENST00000451006 455 ntBASIC15.05■□□□□ -0
AP4B1Q9Y6B7 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.05■□□□□ -0
AP4B1Q9Y6B7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.05■□□□□ -0
AP4B1Q9Y6B7 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.05■□□□□ -0
AP4B1Q9Y6B7 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.05■□□□□ -0
AP4B1Q9Y6B7 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
AP4B1Q9Y6B7 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.05■□□□□ -0
AP4B1Q9Y6B7 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.05■□□□□ -0
AP4B1Q9Y6B7 MIR4469-201ENST00000583919 79 ntBASIC15.05■□□□□ -0
AP4B1Q9Y6B7 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
AP4B1Q9Y6B7 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.05■□□□□ -0
AP4B1Q9Y6B7 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.05■□□□□ -0
AP4B1Q9Y6B7 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
AP4B1Q9Y6B7 AC139530.3-201ENST00000620344 690 ntBASIC15.05■□□□□ -0
AP4B1Q9Y6B7 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.05■□□□□ -0
AP4B1Q9Y6B7 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.05■□□□□ -0
AP4B1Q9Y6B7 AC126365.1-201ENST00000578585 1514 ntBASIC15.05■□□□□ -0
AP4B1Q9Y6B7 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
AP4B1Q9Y6B7 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.05■□□□□ -0
AP4B1Q9Y6B7 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
AP4B1Q9Y6B7 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
AP4B1Q9Y6B7 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
AP4B1Q9Y6B7 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
AP4B1Q9Y6B7 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
AP4B1Q9Y6B7 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
AP4B1Q9Y6B7 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
AP4B1Q9Y6B7 AC009090.5-201ENST00000624886 2285 ntBASIC15.05■□□□□ -0
AP4B1Q9Y6B7 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
AP4B1Q9Y6B7 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.05■□□□□ -0
AP4B1Q9Y6B7 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ -0
AP4B1Q9Y6B7 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
AP4B1Q9Y6B7 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
AP4B1Q9Y6B7 ST20-AS1-201ENST00000560255 4223 ntBASIC15.05■□□□□ -0
AP4B1Q9Y6B7 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.04■□□□□ -0
AP4B1Q9Y6B7 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
AP4B1Q9Y6B7 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.04■□□□□ -0
AP4B1Q9Y6B7 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
AP4B1Q9Y6B7 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.04■□□□□ -0
AP4B1Q9Y6B7 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
AP4B1Q9Y6B7 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
AP4B1Q9Y6B7 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
AP4B1Q9Y6B7 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.04■□□□□ -0
AP4B1Q9Y6B7 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.04■□□□□ -0
AP4B1Q9Y6B7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.04■□□□□ -0
AP4B1Q9Y6B7 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.04■□□□□ -0
AP4B1Q9Y6B7 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.04■□□□□ -0
AP4B1Q9Y6B7 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
AP4B1Q9Y6B7 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.04■□□□□ -0
AP4B1Q9Y6B7 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.04■□□□□ -0
AP4B1Q9Y6B7 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
AP4B1Q9Y6B7 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
AP4B1Q9Y6B7 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms