Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CTDP1Q9Y5B0 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.99■□□□□ 0.47
CTDP1Q9Y5B0 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.99■□□□□ 0.47
CTDP1Q9Y5B0 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CTDP1Q9Y5B0 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CTDP1Q9Y5B0 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CTDP1Q9Y5B0 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.99■□□□□ 0.47
CTDP1Q9Y5B0 PCDH8P1-201ENST00000428983 2773 ntBASIC17.99■□□□□ 0.47
CTDP1Q9Y5B0 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CTDP1Q9Y5B0 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CTDP1Q9Y5B0 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CTDP1Q9Y5B0 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.99■□□□□ 0.47
CTDP1Q9Y5B0 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.99■□□□□ 0.47
CTDP1Q9Y5B0 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CTDP1Q9Y5B0 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CTDP1Q9Y5B0 ANKRD19P-201ENST00000338192 862 ntBASIC17.99■□□□□ 0.47
CTDP1Q9Y5B0 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CTDP1Q9Y5B0 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CTDP1Q9Y5B0 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CTDP1Q9Y5B0 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.99■□□□□ 0.47
CTDP1Q9Y5B0 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
CTDP1Q9Y5B0 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CTDP1Q9Y5B0 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.99■□□□□ 0.47
CTDP1Q9Y5B0 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.99■□□□□ 0.47
CTDP1Q9Y5B0 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CTDP1Q9Y5B0 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.99■□□□□ 0.47
CTDP1Q9Y5B0 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
CTDP1Q9Y5B0 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CTDP1Q9Y5B0 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.99■□□□□ 0.47
CTDP1Q9Y5B0 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CTDP1Q9Y5B0 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.99■□□□□ 0.47
CTDP1Q9Y5B0 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 FTH1P14-201ENST00000482930 551 ntBASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 KRT18P25-201ENST00000508931 1278 ntBASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 PCDHA3-202ENST00000532566 4594 ntBASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.98■□□□□ 0.47
CTDP1Q9Y5B0 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CTDP1Q9Y5B0 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTDP1Q9Y5B0 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CTDP1Q9Y5B0 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CTDP1Q9Y5B0 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CTDP1Q9Y5B0 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.97■□□□□ 0.47
CTDP1Q9Y5B0 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CTDP1Q9Y5B0 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.97■□□□□ 0.47
CTDP1Q9Y5B0 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CTDP1Q9Y5B0 FAM21FP-201ENST00000426241 1131 ntBASIC17.97■□□□□ 0.47
CTDP1Q9Y5B0 RPL7P3-201ENST00000441388 714 ntBASIC17.97■□□□□ 0.47
CTDP1Q9Y5B0 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.97■□□□□ 0.47
CTDP1Q9Y5B0 LINC02447-202ENST00000501888 2146 ntBASIC17.97■□□□□ 0.47
CTDP1Q9Y5B0 AC092658.1-201ENST00000505836 891 ntBASIC17.97■□□□□ 0.47
CTDP1Q9Y5B0 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CTDP1Q9Y5B0 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.97■□□□□ 0.47
CTDP1Q9Y5B0 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.97■□□□□ 0.47
CTDP1Q9Y5B0 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
CTDP1Q9Y5B0 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.97■□□□□ 0.47
CTDP1Q9Y5B0 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTDP1Q9Y5B0 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTDP1Q9Y5B0 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.97■□□□□ 0.47
CTDP1Q9Y5B0 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms