Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
YIPF1Q9Y548 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
YIPF1Q9Y548 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.15■□□□□ 0.18
YIPF1Q9Y548 RN7SL48P-201ENST00000579283 293 ntBASIC16.15■□□□□ 0.18
YIPF1Q9Y548 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.15■□□□□ 0.18
YIPF1Q9Y548 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.15■□□□□ 0.18
YIPF1Q9Y548 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
YIPF1Q9Y548 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC16.15■□□□□ 0.18
YIPF1Q9Y548 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC16.15■□□□□ 0.18
YIPF1Q9Y548 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
YIPF1Q9Y548 AC006453.4-201ENST00000636949 1252 ntBASIC16.15■□□□□ 0.18
YIPF1Q9Y548 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
YIPF1Q9Y548 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
YIPF1Q9Y548 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
YIPF1Q9Y548 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.15■□□□□ 0.18
YIPF1Q9Y548 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
YIPF1Q9Y548 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
YIPF1Q9Y548 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
YIPF1Q9Y548 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
YIPF1Q9Y548 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
YIPF1Q9Y548 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
YIPF1Q9Y548 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.15■□□□□ 0.18
YIPF1Q9Y548 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
YIPF1Q9Y548 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
YIPF1Q9Y548 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
YIPF1Q9Y548 CICP13-201ENST00000422015 2789 ntBASIC16.15■□□□□ 0.18
YIPF1Q9Y548 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
YIPF1Q9Y548 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
YIPF1Q9Y548 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
YIPF1Q9Y548 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
YIPF1Q9Y548 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.14■□□□□ 0.17
YIPF1Q9Y548 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
YIPF1Q9Y548 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
YIPF1Q9Y548 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
YIPF1Q9Y548 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
YIPF1Q9Y548 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
YIPF1Q9Y548 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
YIPF1Q9Y548 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
YIPF1Q9Y548 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
YIPF1Q9Y548 KRT8P14-201ENST00000414254 1442 ntBASIC16.14■□□□□ 0.17
YIPF1Q9Y548 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
YIPF1Q9Y548 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
YIPF1Q9Y548 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
YIPF1Q9Y548 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
YIPF1Q9Y548 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC16.14■□□□□ 0.17
YIPF1Q9Y548 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
YIPF1Q9Y548 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
YIPF1Q9Y548 AL645937.2-201ENST00000396808 931 ntBASIC16.14■□□□□ 0.17
YIPF1Q9Y548 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.14■□□□□ 0.17
YIPF1Q9Y548 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.14■□□□□ 0.17
YIPF1Q9Y548 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
YIPF1Q9Y548 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.14■□□□□ 0.17
YIPF1Q9Y548 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.14■□□□□ 0.17
YIPF1Q9Y548 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC16.14■□□□□ 0.17
YIPF1Q9Y548 SAMD11P1-201ENST00000571429 661 ntBASIC16.14■□□□□ 0.17
YIPF1Q9Y548 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.14■□□□□ 0.17
YIPF1Q9Y548 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.14■□□□□ 0.17
YIPF1Q9Y548 MIR6787-201ENST00000616675 61 ntBASIC16.14■□□□□ 0.17
YIPF1Q9Y548 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.14■□□□□ 0.17
YIPF1Q9Y548 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.14■□□□□ 0.17
YIPF1Q9Y548 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
YIPF1Q9Y548 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.14■□□□□ 0.17
YIPF1Q9Y548 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.14■□□□□ 0.17
YIPF1Q9Y548 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.14■□□□□ 0.17
YIPF1Q9Y548 AL513523.2-202ENST00000427283 2040 ntBASIC16.14■□□□□ 0.17
YIPF1Q9Y548 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.14■□□□□ 0.17
YIPF1Q9Y548 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.14■□□□□ 0.17
YIPF1Q9Y548 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
YIPF1Q9Y548 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
YIPF1Q9Y548 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
YIPF1Q9Y548 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
YIPF1Q9Y548 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
YIPF1Q9Y548 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.14■□□□□ 0.17
YIPF1Q9Y548 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.14■□□□□ 0.17
YIPF1Q9Y548 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
YIPF1Q9Y548 KRT8P44-201ENST00000441609 1350 ntBASIC16.13■□□□□ 0.17
YIPF1Q9Y548 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.13■□□□□ 0.17
YIPF1Q9Y548 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
YIPF1Q9Y548 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.13■□□□□ 0.17
YIPF1Q9Y548 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
YIPF1Q9Y548 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
YIPF1Q9Y548 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
YIPF1Q9Y548 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
YIPF1Q9Y548 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
YIPF1Q9Y548 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
YIPF1Q9Y548 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
YIPF1Q9Y548 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
YIPF1Q9Y548 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
YIPF1Q9Y548 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
YIPF1Q9Y548 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
YIPF1Q9Y548 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
YIPF1Q9Y548 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
YIPF1Q9Y548 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
YIPF1Q9Y548 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
YIPF1Q9Y548 MIR326-201ENST00000362220 95 ntBASIC16.13■□□□□ 0.17
YIPF1Q9Y548 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.13■□□□□ 0.17
YIPF1Q9Y548 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
YIPF1Q9Y548 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.13■□□□□ 0.17
YIPF1Q9Y548 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
YIPF1Q9Y548 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms