Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 AL078644.1-201ENST00000609881 752 ntBASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 AL645728.2-201ENST00000641974 660 ntBASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
RCL1Q9Y2P8 BNIP3P1-202ENST00000550043 1585 ntBASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 WASH3P-207ENST00000560956 1394 ntBASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 FO538757.1-201ENST00000623083 1397 ntBASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
RCL1Q9Y2P8 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 CICP20-201ENST00000443330 2801 ntBASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms