Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 LRRIQ3-203ENST00000370911 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 SDHAP3-202ENST00000515467 728 ntBASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 AC051619.7-201ENST00000568314 623 ntBASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 AL158211.3-201ENST00000607385 239 ntBASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 AC074044.1-201ENST00000609673 707 ntBASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 AL138828.2-201ENST00000615812 383 ntBASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 AC138035.3-201ENST00000622706 2791 ntBASIC15.58■□□□□ 0.09
VPS9D1Q9Y2B5 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
VPS9D1Q9Y2B5 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
VPS9D1Q9Y2B5 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.58■□□□□ 0.09
VPS9D1Q9Y2B5 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
VPS9D1Q9Y2B5 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.58■□□□□ 0.09
VPS9D1Q9Y2B5 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
VPS9D1Q9Y2B5 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
VPS9D1Q9Y2B5 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
VPS9D1Q9Y2B5 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
VPS9D1Q9Y2B5 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.58■□□□□ 0.09
VPS9D1Q9Y2B5 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
VPS9D1Q9Y2B5 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VPS9D1Q9Y2B5 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
VPS9D1Q9Y2B5 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.58■□□□□ 0.08
VPS9D1Q9Y2B5 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VPS9D1Q9Y2B5 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VPS9D1Q9Y2B5 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.58■□□□□ 0.08
VPS9D1Q9Y2B5 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.58■□□□□ 0.08
VPS9D1Q9Y2B5 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VPS9D1Q9Y2B5 AC009090.5-201ENST00000624886 2285 ntBASIC15.58■□□□□ 0.08
VPS9D1Q9Y2B5 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VPS9D1Q9Y2B5 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VPS9D1Q9Y2B5 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VPS9D1Q9Y2B5 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC15.58■□□□□ 0.08
VPS9D1Q9Y2B5 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.58■□□□□ 0.08
VPS9D1Q9Y2B5 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.58■□□□□ 0.08
VPS9D1Q9Y2B5 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
VPS9D1Q9Y2B5 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.58■□□□□ 0.08
VPS9D1Q9Y2B5 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.58■□□□□ 0.08
VPS9D1Q9Y2B5 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
VPS9D1Q9Y2B5 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC15.58■□□□□ 0.08
VPS9D1Q9Y2B5 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.58■□□□□ 0.08
VPS9D1Q9Y2B5 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.58■□□□□ 0.08
VPS9D1Q9Y2B5 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
VPS9D1Q9Y2B5 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
VPS9D1Q9Y2B5 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
VPS9D1Q9Y2B5 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
VPS9D1Q9Y2B5 KRT8P44-201ENST00000441609 1350 ntBASIC15.58■□□□□ 0.08
VPS9D1Q9Y2B5 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VPS9D1Q9Y2B5 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VPS9D1Q9Y2B5 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
VPS9D1Q9Y2B5 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VPS9D1Q9Y2B5 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
VPS9D1Q9Y2B5 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
VPS9D1Q9Y2B5 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
VPS9D1Q9Y2B5 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.58■□□□□ 0.08
VPS9D1Q9Y2B5 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VPS9D1Q9Y2B5 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
VPS9D1Q9Y2B5 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VPS9D1Q9Y2B5 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 AL133267.1-201ENST00000398220 340 ntBASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.57■□□□□ 0.08
VPS9D1Q9Y2B5 AC015922.1-201ENST00000421102 1152 ntBASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms